AutismKB 2.0

Annotation Detail for AMIGO1


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Basic Information Top
Gene Symbol:AMIGO1 ( AMIGO,AMIGO-1 )
Gene Full Name: adhesion molecule with Ig-like domain 1
Band: 1p13.3
Quick LinksEntrez ID:57463; OMIM: NA; Uniprot ID:AMGO1_HUMAN; ENSEMBL ID: ENSG00000181754; HGNC ID: 20824
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
72N-linked (GlcNAc...) (Potential).
264N-linked (GlcNAc...) (Potential).
315N-linked (GlcNAc...) (Potential).
349N-linked (GlcNAc...) (Potential).
360N-linked (GlcNAc...) (Potential).
477Phosphoserine.
Location(AA) Modifications Resource
72N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
264N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
315N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
349N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
360N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
81Phosphothreonine(MAPK)HMM predict
86Phosphothreonine(PKA)HMM predict
107Phosphoserine(CDK)HMM predict
107Phosphoserine(CDC2)HMM predict
114Phosphotyrosine(Jak)HMM predict
166Phosphoserine(ATM)HMM predict
264N-linkedHMM predict
269N-linkedHMM predict
303Phosphothreonine(MAPK)HMM predict
315N-linkedHMM predict
349N-linkedHMM predict
360N-linkedHMM predict
390Phosphotyrosine(Jak)HMM predict
396S-palmitoylHMM predict
413Phosphoserine(IKK)HMM predict
417Phosphoserine(IKK)HMM predict
477Phosphoserine(PKB)HMM predict
477PhosphoserineHMM predict
477Phosphoserine(CK1)HMM predict
477Phosphoserine(PKG)HMM predict
477Phosphoserine(PKA)HMM predict
481Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020703
  • Location:chr1 109850969-109853826
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
SRF GMOGSE8489 109867603 109868084 481 14017
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 109852779 109853131 352 0
CTCF G2GSE9613 109853578 109853790 212 0
PHF8 HeLaGSE20725 109853222 109854384 1162 0
TFAP2C MCF7GSE21234 109851333 109851945 612 0
hScc1 BcellGSE12603 109853464 109853847 383 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018