Annotation Detail for FAM40B
Basic Information Top
| Gene Symbol: | FAM40B ( - ) |
|---|---|
| Gene Full Name: | family with sequence similarity 40, member B |
| Band: | 7q32.1 |
| Quick Links | Entrez ID:57464; OMIM: NA; Uniprot ID:FA40B_HUMAN; ENSEMBL ID: ENSG00000128578; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 23 | O-linked | HMM predict |
| 42 | Phosphoserine(CK1) | HMM predict |
| 42 | Phosphoserine(PKG) | HMM predict |
| 42 | Phosphoserine(PKA) | HMM predict |
| 55 | Sulfotyrosine | HMM predict |
| 329 | Phosphoserine(ATM) | HMM predict |
| 339 | Methylarginine | HMM predict |
| 371 | Phosphothreonine(CK2) | HMM predict |
| 403 | O-linked | HMM predict |
| 471 | Phosphotyrosine(INSR) | HMM predict |
| 530 | Phosphothreonine(PKC) | HMM predict |
| 531 | O-linked | HMM predict |
| 626 | Phosphoserine(PKG) | HMM predict |
| 810 | Sulfotyrosine | HMM predict |
| 812 | Sulfotyrosine | HMM predict |
- RefSeq ID: NM_020704
- Location:chr7 128861535-128915472
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 128860138 | 128862144 | 2006 | 395 |
| Fos | K562 | GSE19551 | 128860961 | 128861842 | 881 | 134 |
| Rb | Growing | GSE19898 | 128861009 | 128861210 | 201 | 426 |
| hScc1 | G2 | GSE9613 | 128860093 | 128862240 | 2147 | 369 |
| p130 | Senescent | GSE19898 | 128861102 | 128861573 | 471 | 198 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 128925147 | 128925381 | 234 | 9792 |
| CTCF | G2 | GSE9613 | 128929400 | 128930086 | 686 | 14271 |
| P300 | T30-glioblastoma | GSE21026 | 128920986 | 128921594 | 608 | 5818 |
| Sox2 | hES | GSE18292 | 128920744 | 128920936 | 192 | 5368 |
| TAF | Hela | GSE8489 | 128927919 | 128928108 | 189 | 12541 |
| TAF | Hela | GSE8489 | 128928979 | 128929511 | 532 | 13773 |
| hScc1 | Bcell | GSE12603 | 128929167 | 128930319 | 1152 | 14271 |
| hScc1 | G2 | GSE9613 | 128928979 | 128929980 | 1001 | 14007 |
| p130 | Quiescent | GSE19898 | 128927277 | 128927500 | 223 | 11916 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 128899462 | 128899766 | 304 | 0 |
| CTCF | CD4 | SISSRdata | 128899462 | 128899766 | 304 | 0 |
| H3K4me3 | colorectal | cancer | 128861466 | 128861791 | 325 | 0 |
| Myc | K562 | GSE19551 | 128865484 | 128866448 | 964 | 0 |
| Oct1 | Hela | GSE14283 | 128864058 | 128864097 | 39 | 0 |
| hScc1 | Bcell | GSE12603 | 128899395 | 128899817 | 422 | 0 |
| hScc1 | CdLS | GSE12603 | 128899004 | 128899817 | 813 | 0 |
| p130 | Senescent | GSE19898 | 128862205 | 128862521 | 316 | 0 |
Validated miRNA targets