AutismKB 2.0

Annotation Detail for SHROOM4


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Basic Information Top
Gene Symbol:SHROOM4 ( KIAA1202,SHAP )
Gene Full Name: shroom family member 4
Band: Xp11.22
Quick LinksEntrez ID:57477; OMIM: 300579; Uniprot ID:SHRM4_HUMAN; ENSEMBL ID: ENSG00000158352; HGNC ID: 29215
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
54Phosphothreonine(CK2)HMM predict
62N-linkedHMM predict
125Phosphoserine(CK1)HMM predict
133N-linkedHMM predict
142S-palmitoylHMM predict
155Phosphoserine(IKK)HMM predict
190Phosphotyrosine(EGFR)HMM predict
196Phosphoserine(CK2)HMM predict
196O-linkedHMM predict
198N-linkedHMM predict
249Phosphothreonine(MAPK)HMM predict
249Phosphothreonine(CDK)HMM predict
255O-linkedHMM predict
264Phosphoserine(ATM)HMM predict
282Phosphoserine(PKA)HMM predict
299Phosphoserine(PKG)HMM predict
299Phosphoserine(PKA)HMM predict
299Phosphoserine(PKB)HMM predict
378Phosphoserine(CK1)HMM predict
411PhosphoserineHMM predict
448Phosphoserine(CDC2)HMM predict
459Phosphoserine(CDC2)HMM predict
459Phosphoserine(IKK)HMM predict
472Phosphoserine(CK1)HMM predict
491Phosphoserine(ATM)HMM predict
494Phosphoserine(ATM)HMM predict
513N-linkedHMM predict
520Phosphoserine(IKK)HMM predict
530O-linkedHMM predict
532Phosphoserine(IKK)HMM predict
538O-linkedHMM predict
543O-linkedHMM predict
585PhosphoserineHMM predict
629O-linkedHMM predict
629Phosphoserine(ATM)HMM predict
635Phosphoserine(IKK)HMM predict
638Phosphoserine(CK1)HMM predict
648Phosphoserine(CDC2)HMM predict
665Phosphoserine(IKK)HMM predict
669Phosphoserine(ATM)HMM predict
709Phosphoserine(CK2)HMM predict
710Phosphoserine(CK1)HMM predict
710Phosphoserine(ATM)HMM predict
783Phosphoserine(IKK)HMM predict
783Phosphoserine(CK1)HMM predict
785Phosphoserine(CK1)HMM predict
797N-linkedHMM predict
801Phosphothreonine(PKC)HMM predict
837Phosphotyrosine(Syk)HMM predict
844Phosphotyrosine(INSR)HMM predict
857Phosphotyrosine(SRC)HMM predict
999O-linkedHMM predict
1038Phosphoserine(CK1)HMM predict
1040Phosphotyrosine(Syk)HMM predict
1045Phosphoserine(IKK)HMM predict
1059Phosphoserine(CK1)HMM predict
1174O-linkedHMM predict
1176Phosphoserine(IKK)HMM predict
1203Phosphoserine(PKA)HMM predict
1203Phosphoserine(IKK)HMM predict
1203Phosphoserine(ATM)HMM predict
1203PhosphoserineHMM predict
1205Phosphoserine(ATM)HMM predict
1266Phosphoserine(ATM)HMM predict
1266O-linkedHMM predict
1269O-linkedHMM predict
1276O-linkedHMM predict
1281Phosphotyrosine(Syk)HMM predict
1331Phosphoserine(PKG)HMM predict
1456Phosphotyrosine(EGFR)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020717
  • Location:chrX 50351386-50573783
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct4 hESGSE17917 50580224 50580529 305 6593
TFAP2C MCF7GSE21234 50585021 50585477 456 11466
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 50339847 50340058 211 11434
CTCF CD4SISSRdata 50339847 50340058 211 11434
CTCF G2GSE9613 50339549 50339890 341 11667
Nanog ESGSE20650 50341125 50341774 649 9937
Oct1 H2O2-HelaGSE14283 50349581 50349610 29 1791
Oct1 HelaGSE14283 50349583 50349612 29 1789
hScc1 CdLSGSE12603 50339516 50339916 400 11671
hScc1 G2GSE9613 50339434 50340138 704 11601
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 50451521 50451766 245 0
CTCF CD4SISSRdata 50451521 50451766 245 0
CTCF JurkatGSE12889 50484417 50484509 92 0
CTCF G2GSE9613 50354515 50354765 250 0
CTCF G2GSE9613 50356494 50356671 177 0
CTCF G2GSE9613 50366128 50366780 652 0
CTCF G2GSE9613 50394301 50394651 350 0
CTCF G2GSE9613 50394932 50395543 611 0
CTCF G2GSE9613 50403201 50403562 361 0
CTCF G2GSE9613 50440762 50441119 357 0
CTCF G2GSE9613 50451467 50452081 614 0
CTCF G2GSE9613 50476739 50476914 175 0
CTCF G2GSE9613 50507501 50507888 387 0
CTCF G2GSE9613 50559510 50559685 175 0
CTCF G2GSE9613 50573009 50574537 1528 0
Fos K562GSE19551 50393187 50393453 266 0
Nanog ESGSE20650 50354488 50354962 474 0
Nanog hESGSE18292 50354619 50354889 270 0
Nanog hESGSE18292 50471559 50472062 503 0
Oct1 H2O2-HelaGSE14283 50443973 50444001 28 0
Oct1 H2O2-HelaGSE14283 50452221 50452249 28 0
Oct1 HelaGSE14283 50355181 50355220 39 0
Oct1 HelaGSE14283 50443961 50444015 54 0
PAX3-FKHR Rh4GSE19063 50460383 50461351 968 0
hScc1 BcellGSE12603 50451498 50451900 402 0
hScc1 BcellGSE12603 50530427 50530725 298 0
hScc1 G2GSE9613 50393757 50394119 362 0
hScc1 G2GSE9613 50403201 50403562 361 0
hScc1 G2GSE9613 50440652 50441190 538 0
hScc1 G2GSE9613 50451431 50452117 686 0
hScc1 G2GSE9613 50573009 50573937 928 0
p63 keratinocytesGSE17611 50558780 50560033 1253 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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