AutismKB 2.0

Annotation Detail for LRRC7


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Basic Information Top
Gene Symbol:LRRC7 ( DKFZp686I1147,KIAA1365,MGC144918 )
Gene Full Name: leucine rich repeat containing 7
Band: 1p31.1
Quick LinksEntrez ID:57554; OMIM: NA; Uniprot ID:LRRC7_HUMAN; ENSEMBL ID: ENSG00000033122; HGNC ID: 18531
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
90Phosphoserine (By similarity).
850Phosphoserine (By similarity).
865Phosphothreonine (By similarity).
933Phosphoserine (By similarity).
949Phosphoserine (By similarity).
1439Phosphoserine (By similarity).
Location(AA) Modifications Resource
90Phosphoserine (By similarity).Swiss-Prot 53.0
850Phosphoserine (By similarity).Swiss-Prot 53.0
865Phosphothreonine (By similarity).Swiss-Prot 53.0
933Phosphoserine (By similarity).Swiss-Prot 53.0
949Phosphoserine (By similarity).Swiss-Prot 53.0
1439Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
75Phosphoserine(PKG)HMM predict
86O-linkedHMM predict
116S-palmitoylHMM predict
139N-linkedHMM predict
346N-linkedHMM predict
401N-linkedHMM predict
439Phosphoserine(CK2)HMM predict
443Phosphoserine(IKK)HMM predict
445N-linkedHMM predict
458Phosphothreonine(PKA)HMM predict
458Phosphothreonine(PKC)HMM predict
539Phosphoserine(IKK)HMM predict
551O-linkedHMM predict
552O-linkedHMM predict
600N-linkedHMM predict
604N-linkedHMM predict
608Phosphothreonine(PKC)HMM predict
666Phosphoserine(CK2)HMM predict
679N-linkedHMM predict
680N-linkedHMM predict
687Phosphotyrosine(SRC)HMM predict
687Phosphotyrosine(INSR)HMM predict
693Phosphoserine(ATM)HMM predict
696O-linkedHMM predict
697Phosphoserine(IKK)HMM predict
702Phosphothreonine(PKC)HMM predict
741Phosphoserine(ATM)HMM predict
767N-linkedHMM predict
774Phosphotyrosine(INSR)HMM predict
801Phosphoserine(CK1)HMM predict
802Phosphothreonine(PKA)HMM predict
803Phosphoserine(CK1)HMM predict
831Phosphothreonine(CDK)HMM predict
831Phosphothreonine(PKA)HMM predict
831Phosphothreonine(MAPK)HMM predict
844N-linkedHMM predict
848Phosphothreonine(MAPK)HMM predict
865Phosphothreonine(MAPK)HMM predict
865O-linkedHMM predict
867O-linkedHMM predict
867O-linkedHMM predict
869Phosphoserine(CDK)HMM predict
869Phosphoserine(MAPK)HMM predict
869PhosphoserineHMM predict
869Phosphoserine(CDC2)HMM predict
869O-linkedHMM predict
886Phosphoserine(CDC2)HMM predict
889Phosphoserine(CDC2)HMM predict
889Phosphoserine(MAPK)HMM predict
902N-linkedHMM predict
907N-linkedHMM predict
949Phosphoserine(CK2)HMM predict
949Phosphoserine(PKA)HMM predict
968Phosphotyrosine(INSR)HMM predict
997Phosphoserine(ATM)HMM predict
999Phosphoserine(PKA)HMM predict
999Phosphoserine(CAMK2)HMM predict
1024Phosphothreonine(PKC)HMM predict
1072Phosphoserine(MAPK)HMM predict
1079SulfotyrosineHMM predict
1089Phosphoserine(ATM)HMM predict
1118Phosphoserine(PKG)HMM predict
1149MethylarginineHMM predict
1179Phosphotyrosine(SRC)HMM predict
1193N-linkedHMM predict
1195Phosphothreonine(PKC)HMM predict
1206Phosphoserine(CK1)HMM predict
1213Phosphoserine(ATM)HMM predict
1215Phosphothreonine(PKC)HMM predict
1223Phosphothreonine(PKA)HMM predict
1223Phosphothreonine(PKC)HMM predict
1240SulfotyrosineHMM predict
1255Phosphothreonine(PKA)HMM predict
1255Phosphothreonine(CDK)HMM predict
1333Phosphothreonine(CDK)HMM predict
1335PhosphoserineHMM predict
1335Phosphoserine(ATM)HMM predict
1383Phosphoserine(ATM)HMM predict
1410Phosphoserine(CDC2)HMM predict
1419Phosphoserine(ATM)HMM predict
1422O-linkedHMM predict
1462Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020794
  • Location:chr1 69998445-70361756
  • strand:+
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 70371093 70371463 370 9522
Myc K562GSE19551 70371216 70371602 386 9653
hScc1 BcellGSE12603 70371093 70371463 370 9522
hScc1 CdLSGSE12603 70371058 70371463 405 9504
hScc1 G2GSE9613 70371093 70371463 370 9522
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 70186688 70186721 33 0
Myc K562GSE19551 70272698 70273033 335 0
Nanog hESGSE18292 70083783 70084350 567 0
Nanog hESGSE18292 70272554 70273017 463 0
Oct1 H2O2-HelaGSE14283 70071106 70071166 60 0
Oct1 H2O2-HelaGSE14283 70148308 70148336 28 0
Oct1 HelaGSE14283 70046194 70046232 38 0
Oct1 HelaGSE14283 70071106 70071143 37 0
Oct1 HelaGSE14283 70167573 70167608 35 0
Oct1 HelaGSE14283 70194997 70195046 49 0
Oct1 HelaGSE14283 70255038 70255079 41 0
Oct4 hESGSE17917 70172684 70172831 147 0
P300 T30-glioblastomaGSE21026 70328891 70329736 845 0
STAT1 HeLaGSE12783 70231824 70233220 1396 0
STAT1 IFNSISSRdata 70231946 70233154 1208 0
TAF k562GSE8489 70089252 70090152 900 0
TFAP2C MCF7GSE21234 70276233 70276681 448 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
950 mRNA LRRC7 chr1 69937878 70299947 125 EST chr1 70198526 70200105Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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