AutismKB 2.0

Annotation Detail for CRAMP1L


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Basic Information Top
Gene Symbol:CRAMP1L ( HN1L,MGC176736,TCE4 )
Gene Full Name: Crm, cramped-like (Drosophila)
Band: 16p13.3
Quick LinksEntrez ID:57585; OMIM: NA; Uniprot ID:CRML_HUMAN; ENSEMBL ID: ENSG00000007545; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
533Phosphoserine.
1268Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
27Phosphoserine(CK1)HMM predict
45Phosphothreonine(PKC)HMM predict
70O-linkedHMM predict
70Phosphoserine(CDC2)HMM predict
75O-linkedHMM predict
100Phosphoserine(IKK)HMM predict
262N-linkedHMM predict
267N-linkedHMM predict
276Phosphothreonine(PKC)HMM predict
304Phosphoserine(CK2)HMM predict
353Phosphoserine(PKG)HMM predict
373Phosphothreonine(PKC)HMM predict
382Phosphoserine(IKK)HMM predict
400N-linkedHMM predict
486Phosphoserine(CK2)HMM predict
501Phosphoserine(CK1)HMM predict
502Phosphoserine(CDC2)HMM predict
502Phosphoserine(MAPK)HMM predict
516Phosphothreonine(PKA)HMM predict
530Phosphoserine(CDC2)HMM predict
553Phosphoserine(CK1)HMM predict
561Phosphotyrosine(Jak)HMM predict
613O-linkedHMM predict
613Phosphoserine(CDC2)HMM predict
642Phosphoserine(CDC2)HMM predict
649O-linkedHMM predict
649Phosphoserine(ATM)HMM predict
689Phosphotyrosine(Syk)HMM predict
716Phosphoserine(IKK)HMM predict
764Phosphothreonine(CDC2)HMM predict
771Phosphothreonine(PKC)HMM predict
776Phosphoserine(CDC2)HMM predict
776Phosphoserine(CDK)HMM predict
795O-linkedHMM predict
796O-linkedHMM predict
817O-linkedHMM predict
820Phosphoserine(IKK)HMM predict
821N-linkedHMM predict
845Phosphoserine(CDC2)HMM predict
847Phosphoserine(CK2)HMM predict
897N-linkedHMM predict
901N-linkedHMM predict
910N-linkedHMM predict
1029Phosphoserine(IKK)HMM predict
1037Phosphoserine(CK1)HMM predict
1060O-linkedHMM predict
1060Phosphoserine(CK1)HMM predict
1086Phosphoserine(ATM)HMM predict
1086Phosphoserine(CK1)HMM predict
1097Phosphoserine(CK2)HMM predict
1108Phosphotyrosine(INSR)HMM predict
1115Phosphoserine(CDC2)HMM predict
1120N-linkedHMM predict
1127Phosphoserine(IKK)HMM predict
1127O-linkedHMM predict
1127Phosphoserine(CK1)HMM predict
1130O-linkedHMM predict
1130Phosphoserine(MAPK)HMM predict
1130Phosphoserine(IKK)HMM predict
1130Phosphoserine(CDC2)HMM predict
1132O-linkedHMM predict
1133Phosphoserine(IKK)HMM predict
1134Phosphoserine(CDC2)HMM predict
1134Phosphoserine(ATM)HMM predict
1157Phosphoserine(CK1)HMM predict
1168Phosphoserine(CDK)HMM predict
1168Phosphoserine(CDC2)HMM predict
1241Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020825
  • Location:chr16 1604901-1667907
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 1602360 1603176 816 2134
CTCF G2GSE9613 1604031 1604875 844 449
ETS1 JurkatGSE17954 1601671 1602637 966 2748
Fos K562GSE19551 1601826 1602543 717 2717
H3K4me3 colorectalcancer 1602403 1603504 1101 1948
H3ac HepG2E 1602877 1603869 992 1529
LIN9 G0GSE7516 1601845 1602068 223 2945
PHF8 HeLaGSE20725 1602235 1603007 772 2281
Rb GrowingGSE19898 1601856 1602093 237 2927
Rb QuiescentGSE19898 1601857 1602368 511 2789
Rb QuiescentGSE19898 1602726 1602920 194 2079
Rb SenescentGSE19898 1601809 1602449 640 2773
Rb shRbQuiescentGSE19898 1601855 1602156 301 2896
Rb shRbSenescenceGSE19898 1601790 1602293 503 2860
hScc1 BcellGSE12603 1604071 1604738 667 497
p130 QuiescentGSE19898 1601821 1602230 409 2876
p130 SenescentGSE19898 1601834 1602253 419 2858
p130 shRbQuiescentGSE19898 1601888 1602318 430 2799
p130 shRbSenescentGSE19898 1601780 1602331 551 2846
p130 shRbSenescentGSE19898 1602658 1603060 402 2043
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 1641664 1642091 427 0
CTCF G2GSE9613 1646946 1648478 1532 0
FOXA1 MCF7GSE15244 1641024 1642189 1165 0
FoxA1 MCF7MACSdata 1620908 1621199 291 0
FoxA1 MCF7MACSdata 1635937 1636267 330 0
H3ac HepG2E 1605015 1605947 932 0
P300 T0-glioblastomaGSE21026 1635788 1636637 849 0
RARA MCF7GSE15244 1640812 1642226 1414 0
RARG MCF7GSE15244 1640847 1642226 1379 0
TFAP2C MCF7GSE21234 1620623 1621393 770 0
TFAP2C MCF7GSE21234 1635461 1636577 1116 0
TFAP2C MCF7GSE21234 1659575 1660242 667 0
VDR GM10861-stimGSE22484 1640690 1642519 1829 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9453 mRNA CRAMP1L chr16 1604901 1667908 188 EST chr16 1615416 1616162Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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