AutismKB 2.0

Annotation Detail for PHF12


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Basic Information Top
Gene Symbol:PHF12 ( FLJ34122,KIAA1523,MGC131914,PF1 )
Gene Full Name: PHD finger protein 12
Band: 17q11.2
Quick LinksEntrez ID:57649; OMIM: NA; Uniprot ID:PHF12_HUMAN; ENSEMBL ID: ENSG00000109118; HGNC ID: 20816
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
131Phosphoserine.
133Phosphoserine.
134Phosphoserine.
671Phosphothreonine.
880Phosphothreonine.
Location(AA) Modifications Resource
131Phosphoserine.Swiss-Prot 53.0
131PhosphoserinePhospho.ELM 6.0
134PhosphoserinePhospho.ELM 6.0
880Phosphothreonine.Swiss-Prot 53.0
880PhosphothreoninePhospho.ELM 6.0
Location(AA) Modification Resource
71S-palmitoylHMM predict
74S-palmitoylHMM predict
102S-palmitoylHMM predict
130Phosphothreonine(PKC)HMM predict
130Phosphothreonine(PKA)HMM predict
131Phosphoserine(IKK)HMM predict
131Phosphoserine(CAMK2)HMM predict
131Phosphoserine(CDC2)HMM predict
131O-linkedHMM predict
144Phosphoserine(CK1)HMM predict
162Phosphoserine(PKA)HMM predict
162Phosphoserine(PKC)HMM predict
162Phosphoserine(PKG)HMM predict
166Phosphothreonine(MAPK)HMM predict
166Phosphothreonine(CDK)HMM predict
168O-linkedHMM predict
169Phosphoserine(IKK)HMM predict
169O-linkedHMM predict
170O-linkedHMM predict
172O-linkedHMM predict
172O-linkedHMM predict
175Phosphothreonine(MAPK)HMM predict
175O-linkedHMM predict
175Phosphothreonine(CDK)HMM predict
177O-linkedHMM predict
201Phosphotyrosine(Jak)HMM predict
201Phosphotyrosine(Abl)HMM predict
201Phosphotyrosine(INSR)HMM predict
201SulfotyrosineHMM predict
221N-linkedHMM predict
241Phosphoserine(PKC)HMM predict
328N-linkedHMM predict
333N-linkedHMM predict
486Phosphothreonine(MAPK)HMM predict
486O-linkedHMM predict
488Phosphothreonine(MAPK)HMM predict
507O-linkedHMM predict
509Phosphoserine(ATM)HMM predict
532PhosphothreonineHMM predict
553Phosphotyrosine(INSR)HMM predict
553Phosphotyrosine(Abl)HMM predict
555Phosphoserine(ATM)HMM predict
555Phosphoserine(CDC2)HMM predict
557O-linkedHMM predict
570Phosphothreonine(MAPK)HMM predict
586Phosphothreonine(MAPK)HMM predict
586Phosphothreonine(CDK)HMM predict
595N-linkedHMM predict
606N-linkedHMM predict
617O-linkedHMM predict
623O-linkedHMM predict
627Phosphoserine(IKK)HMM predict
630Phosphoserine(CK2)HMM predict
634Phosphoserine(IKK)HMM predict
662Phosphoserine(CDC2)HMM predict
665N-linkedHMM predict
671Phosphothreonine(CDK)HMM predict
690O-linkedHMM predict
691Phosphoserine(CDC2)HMM predict
691Phosphoserine(PKB)HMM predict
691Phosphoserine(CDK)HMM predict
715O-linkedHMM predict
719N-linkedHMM predict
769O-linkedHMM predict
769Phosphoserine(CDC2)HMM predict
835Phosphotyrosine(Jak)HMM predict
856N-linkedHMM predict
880Phosphothreonine(MAPK)HMM predict
880Phosphothreonine(CDK)HMM predict
906Phosphoserine(CK2)HMM predict
906Phosphoserine(CK1)HMM predict
914Phosphoserine(ATM)HMM predict
932Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020889
  • Location:chr17 24263287-24302633
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 24302284 24304263 1979 640
HIF1 HypoHepG2 24302408 24303189 781 165
NRSF mAbJurkat 24303736 24304823 1087 1646
Oct1 HelaGSE14283 24303077 24303105 28 458
P300 T30-glioblastomaGSE21026 24302333 24304248 1915 657
PHF8 Hs68minusFBSGSE20725 24302573 24303759 1186 533
RARG MCF7GSE15244 24303117 24304238 1121 1044
Rb GrowingGSE19898 24302673 24303165 492 286
Rb GrowingGSE19898 24303698 24303902 204 1167
Rb QuiescentGSE19898 24302718 24302974 256 213
Rb QuiescentGSE19898 24303588 24303898 310 1110
Rb SenescentGSE19898 24302561 24303298 737 296
Rb SenescentGSE19898 24303531 24303921 390 1093
p130 QuiescentGSE19898 24302775 24303684 909 596
p130 SenescentGSE19898 24302695 24303753 1058 591
p130 shRbQuiescentGSE19898 24302845 24303658 813 618
p130 shRbQuiescentGSE19898 24303673 24304132 459 1269
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 24267619 24267831 212 0
CTCF CD4SISSRdata 24267619 24267831 212 0
CTCF G2GSE9613 24267646 24267824 178 0
Gata2 K562GSE18868 24263411 24264494 1083 0
H3ac HepG2E 24298881 24300318 1437 0
H3ac HepG2E 24301672 24302124 452 0
Oct1 HelaGSE14283 24267102 24267131 29 0
Oct1 HelaGSE14283 24283147 24283187 40 0
P300 T30-glioblastomaGSE21026 24276970 24277723 753 0
Rb GrowingGSE19898 24300438 24300582 144 0
Rb QuiescentGSE19898 24300361 24300509 148 0
TAF k562GSE8489 24298992 24299934 942 0
TFAP2C MCF7GSE21234 24277843 24278346 503 0
TFAP2C MCF7GSE21234 24300081 24300697 616 0
hScc1 CdLSGSE12603 24301594 24302730 1136 0
p130 SenescentGSE19898 24300356 24300726 370 0
p130 shRbQuiescentGSE19898 24301378 24302367 989 0
p130 shRbSenescentGSE19898 24300387 24300646 259 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
10869 mRNA chr17 24277418 24295890 454 mRNA PHF12 chr17 24260713 24302098Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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