Annotation Detail for GPAM

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Basic Information Top

Gene Symbol:	GPAM ( GPAT,GPAT1,KIAA1560,MGC26846 )
Gene Full Name:	glycerol-3-phosphate acyltransferase, mitochondrial
Band:	10q25.2
Quick Links	Entrez ID:57678; OMIM: 602395; Uniprot ID:GPAT1_HUMAN; ENSEMBL ID: ENSG00000119927; HGNC ID: 24865
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ETS1	Jurkat	GSE17954	113933044	113934069	1025	49
Fos	K562	GSE19551	113952429	113952722	293	19068
Myc	K562	GSE19551	113933268	113933861	593	57
Myc	hES	GSE17917	113933448	113933783	335	108
NRSF	Jurkat	SISSRdata	113933416	113933736	320	69
Oct1	H2O2-Hela	GSE14283	113946420	113946453	33	12929
Oct1	Hela	GSE14283	113946421	113946457	36	12932
Rb	Senescent	GSE19898	113933380	113933651	271	8
p130	Senescent	GSE19898	113933298	113933986	688	135

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	113887246	113887520	274	12229
CTCF	CD4	GSE12889	113890003	113890228	225	9496
CTCF	CD4	SISSRdata	113887246	113887520	274	12229
CTCF	CD4	SISSRdata	113890003	113890228	225	9496
Oct1	Hela	GSE14283	113896210	113896265	55	3374
RARG	MCF7	GSE15244	113890093	113890862	769	9134
Rb	Quiescent	GSE19898	113887169	113887339	170	12358
STAT1	HeLa	GSE12783	113883696	113885240	1544	15144
hScc1	Bcell	GSE12603	113886802	113887529	727	12446
hScc1	Bcell	GSE12603	113888975	113889144	169	10552
hScc1	Bcell	GSE12603	113889749	113890130	381	9672
hScc1	CdLS	GSE12603	113886949	113887529	580	12373
hScc1	G2	GSE9613	113886873	113887572	699	12389
hScc1	G2	GSE9613	113889791	113890459	668	9487

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
Oct1	H2O2-Hela	GSE14283	113920905	113920935	30
PHF8	293T	GSE20725	113932790	113934192	1402
PHF8	HeLa	GSE20725	113932931	113933955	1024
Rb	Quiescent	GSE19898	113933343	113933641	298

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7b	hsa-let-7b	22	18668040
hsa-let-7b*	hsa-let-7b	22	18668040
hsa-miR-1	hsa-mir-1-2	18	18668040
hsa-miR-1	hsa-mir-1-1	20	18668040
hsa-miR-155	hsa-mir-155	21	18668040
hsa-miR-155*	hsa-mir-155	21	18668040
hsa-miR-16	hsa-mir-16-1	13	18668040
hsa-miR-16	hsa-mir-16-2	3	18668040
hsa-miR-30a	hsa-mir-30a	6	18668040
hsa-miR-30a*	hsa-mir-30a	6	18668040
hsa-miR-30b	hsa-mir-30b	8	18668040
hsa-miR-30b*	hsa-mir-30b	8	18668040
hsa-miR-30c	hsa-mir-30c-2	6	18668040
hsa-miR-30c	hsa-mir-30c-1	1	18668040
hsa-miR-30c-1*	hsa-mir-30c-1	1	18668040
hsa-miR-30c-2*	hsa-mir-30c-2	6	18668040
hsa-miR-30d	hsa-mir-30d	8	18668040
hsa-miR-30d*	hsa-mir-30d	8	18668040
hsa-miR-30e	hsa-mir-30e	1	18668040
hsa-miR-30e*	hsa-mir-30e	1	18668040

ID in Tarbase	Data Type	Support Type	miRNA	Gene	Direct Support	Publication
1046	Unknown	pSILAC	miR-16	GPAM	down 50-25%	18668040
Ensembl	Protein Type	Differentially expressed in	Pathology or Event	Mis Regulation	Gene Expression	Tumour Involvement
ENSG00000119927		n_a	n_a	n_a	"lymphocyte, muscle cell"	"benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma"

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018