AutismKB 2.0

Annotation Detail for LRRC4C


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Basic Information Top
Gene Symbol:LRRC4C ( KIAA1580,NGL-1,NGL1 )
Gene Full Name: leucine rich repeat containing 4C
Band: 11p12
Quick LinksEntrez ID:57689; OMIM: 608817; Uniprot ID:LRC4C_HUMAN; ENSEMBL ID: ENSG00000148948; HGNC ID: 29317
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020929
  • Location:chr11 40092328-40272239
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 DLD1GSE12801 40288384 40288805 421 16355
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 40078377 40078663 286 13809
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 40220820 40220909 89 0
FOXA1 MCF7GSE15244 40153200 40153785 585 0
KLF4 hESGSE17917 40115471 40115755 284 0
NRSF pAbJurkat 40165006 40165182 176 0
Nanog ESGSE20650 40224942 40225698 756 0
Oct1 H2O2-HelaGSE14283 40135240 40135284 44 0
Oct1 HelaGSE14283 40135231 40135283 52 0
RARA MCF7GSE15244 40251952 40252754 802 0
TAF k562GSE8489 40121719 40121974 255 0
TFAP2C MCF7GSE21234 40108620 40108946 326 0
TFAP2C MCF7GSE21234 40164606 40165349 743 0
hScc1 BcellGSE12603 40107392 40107832 440 0
hScc1 BcellGSE12603 40108492 40109020 528 0
hScc1 BcellGSE12603 40271672 40272644 972 0
hScc1 CdLSGSE12603 40107357 40107938 581 0
hScc1 CdLSGSE12603 40108181 40109121 940 0
hScc1 CdLSGSE12603 40271636 40272644 1008 0
hScc1 G2GSE9613 40107429 40107901 472 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018