AutismKB 2.0

Annotation Detail for SEMA4G


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Basic Information Top
Gene Symbol:SEMA4G ( FLJ20590,KIAA1619,MGC102867 )
Gene Full Name: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
Band: 10q24.31
Quick LinksEntrez ID:57715; OMIM: NA; Uniprot ID:SEM4G_HUMAN; ENSEMBL ID: ENSG00000095539; HGNC ID: 10735
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
55N-linked (GlcNAc...) (Potential).
111N-linked (GlcNAc...) (Potential).
126N-linked (GlcNAc...) (Potential).
388N-linked (GlcNAc...) (Potential).
542N-linked (GlcNAc...) (Potential).
598N-linked (GlcNAc...) (Potential).
795Phosphoserine (By similarity).
Location(AA) Modifications Resource
55N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
111N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
126N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
388N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
542N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
598N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
795Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
16O-linkedHMM predict
111N-linkedHMM predict
117N-linkedHMM predict
126N-linkedHMM predict
165Phosphotyrosine(Syk)HMM predict
227Phosphoserine(PKG)HMM predict
239Phosphotyrosine(Syk)HMM predict
253Phosphoserine(IKK)HMM predict
255Phosphothreonine(PKC)HMM predict
388N-linkedHMM predict
390Phosphoserine(ATM)HMM predict
395Phosphoserine(MAPK)HMM predict
433O-linkedHMM predict
433Phosphothreonine(CDK)HMM predict
436O-linkedHMM predict
437O-linkedHMM predict
542N-linkedHMM predict
604Phosphoserine(ATM)HMM predict
630Phosphotyrosine(INSR)HMM predict
649Phosphothreonine(PKC)HMM predict
654Phosphothreonine(MAPK)HMM predict
664Phosphothreonine(MAPK)HMM predict
713Phosphoserine(PKG)HMM predict
713Phosphoserine(CAMK2)HMM predict
718Phosphoserine(PKG)HMM predict
827Phosphothreonine(PKA)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_017893
  • Location:chr10 102722275-102735361
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 102718958 102719181 223 3206
CTCF CD4SISSRdata 102718958 102719181 223 3206
H3ac HepG2E 102719737 102721124 1387 1845
H3ac HepG2E 102721399 102722536 1137 308
Myc K562GSE19551 102718732 102719252 520 3284
Rb QuiescentGSE19898 102718727 102718870 143 3477
hScc1 CdLSGSE12603 102718773 102719268 495 3255
p130 SenescentGSE19898 102719713 102719908 195 2465
p130 shRbSenescentGSE19898 102718953 102719152 199 3223
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
RARA MCF7GSE15244 102726749 102727398 649 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
3575 mRNA SEMA4G chr10 102722275 102735362 611 mRNA MRPL43 chr10 102727568 102737262Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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