AutismKB 2.0

Annotation Detail for PCDHB16


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:PCDHB16 ( KIAA1621,ME1,PCDH-BETA16,PCDH3X,PCDHB8a )
Gene Full Name: protocadherin beta 16
Band: 5q31.3
Quick LinksEntrez ID:57717; OMIM: 606345; Uniprot ID:PCDBG_HUMAN; ENSEMBL ID: ENSG00000196963; HGNC ID: 14546
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
418N-linked (GlcNAc...) (Potential).
436N-linked (GlcNAc...) (Potential).
567N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
418N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
436N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
567N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
173Phosphoserine(CDC2)HMM predict
223O-linkedHMM predict
348O-linkedHMM predict
350O-linkedHMM predict
354Phosphoserine(MAPK)HMM predict
418N-linkedHMM predict
436N-linkedHMM predict
454O-linkedHMM predict
463N-linkedHMM predict
464N-linkedHMM predict
538Phosphoserine(IKK)HMM predict
542Phosphoserine(CK1)HMM predict
567N-linkedHMM predict
584Phosphotyrosine(Jak)HMM predict
653O-linkedHMM predict
717Phosphoserine(PKA)HMM predict
740O-linkedHMM predict
746Phosphoserine(ATM)HMM predict
761Phosphothreonine(PKC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020957
  • Location:chr5 140541163-140545978
  • strand:+
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 140543897 140544489 592 0
hScc1 BcellGSE12603 140543750 140544206 456 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018