Annotation Detail for SUGP1

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Basic Information Top

Gene Symbol:	SUGP1 ( DKFZp434E2216,F23858,RBP,SF4 )
Gene Full Name:	SURP and G patch domain containing 1
Band:	19p13
Quick Links	Entrez ID:57794; OMIM: 607992; Uniprot ID:SUGP1_HUMAN; ENSEMBL ID: ENSG00000105705; HGNC ID: 18643
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:5 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
386	Nuclear localization signal (Potential).
409	Phosphoserine.
411	Phosphoserine.
414	Phosphoserine.
485	Phosphoserine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_172231
Location:chr19 19248322-19292306
strand:-

Upstream the gene:9 results
Downstream the gene:0 results
Inside the gene:11 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ETS1	Jurkat	GSE17954	19291876	19293598	1722	431
H3K4me3	colorectal	cancer	19292972	19293770	798	1065
H3ac	HepG2	E	19293254	19293770	516	1206
Oct1	H2O2-Hela	GSE14283	19292286	19292336	50	5
P300	T30-glioblastoma	GSE21026	19291950	19293186	1236	262
PHF8	HeLa	GSE20725	19291585	19293194	1609	83
PHF8	Hs68plusFBS	GSE20725	19291850	19293788	1938	513
TAF	k562	GSE8489	19293086	19293770	684	1122
hScc1	Bcell	GSE12603	19292272	19293000	728	330

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
H3K4me3	colorectal	cancer	19291554	19292398	844	0
Oct1	H2O2-Hela	GSE14283	19283974	19284001	27	0
Oct1	Hela	GSE14283	19270228	19270261	33	0
Oct1	Hela	GSE14283	19283973	19284001	28	0
Rb	Growing	GSE19898	19291735	19291885	150	0
Rb	Senescent	GSE19898	19291645	19292003	358	0
Rb	shRbSenescence	GSE19898	19291714	19291970	256	0
TAF	k562	GSE8489	19291554	19291951	397	0
hScc1	Bcell	GSE12603	19251759	19252041	282	0
hScc1	Bcell	GSE12603	19277295	19277603	308	0
p130	Senescent	GSE19898	19291888	19292080	192	0

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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