AutismKB 2.0

Annotation Detail for SLC4A5


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Basic Information Top
Gene Symbol:SLC4A5 ( MGC129662,NBC4 )
Gene Full Name: solute carrier family 4, sodium bicarbonate cotransporter, member 5
Band: 2p13.1
Quick LinksEntrez ID:57835; OMIM: 606757; Uniprot ID:S4A5_HUMAN; ENSEMBL ID: ENSG00000188687; HGNC ID: 18168
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_021196
  • Location:chr2 74302102-74395657
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 74330698 74331137 439 0
CTCF CD4GSE12889 74347726 74347939 213 0
CTCF CD4SISSRdata 74330698 74331137 439 0
CTCF CD4SISSRdata 74347726 74347939 213 0
CTCF HelaGSE12889 74342295 74342497 202 0
CTCF JurkatGSE12889 74347743 74347942 199 0
CTCF G2GSE9613 74309468 74309711 243 0
CTCF G2GSE9613 74328699 74329110 411 0
CTCF G2GSE9613 74330774 74331345 571 0
CTCF G2GSE9613 74338513 74338843 330 0
CTCF G2GSE9613 74341921 74342970 1049 0
CTCF G2GSE9613 74363507 74363798 291 0
CTCF G2GSE9613 74364152 74364313 161 0
CTCF G2GSE9613 74367487 74367726 239 0
CTCF G2GSE9613 74370630 74371003 373 0
CTCF G2GSE9613 74384837 74385058 221 0
CTCF G2GSE9613 74387304 74387875 571 0
CTCF G2GSE9613 74388450 74388661 211 0
ER MCF7GSE19013 74352247 74353015 768 0
FOXA1 MCF7GSE15244 74372940 74374138 1198 0
FoxA1 MCF7MACSdata 74347815 74348009 194 0
FoxA1 MCF7MACSdata 74373368 74373695 327 0
Myc K562GSE19551 74347766 74348049 283 0
Oct1 H2O2-HelaGSE14283 74392171 74392212 41 0
Oct1 HelaGSE14283 74363273 74363313 40 0
Oct1 HelaGSE14283 74368064 74368100 36 0
Oct1 HelaGSE14283 74392147 74392211 64 0
P300 T30-glioblastomaGSE21026 74317274 74318030 756 0
STAT1 HeLaGSE12782 74347232 74348874 1642 0
STAT1 HeLaGSE12783 74341513 74343193 1680 0
STAT1 HeLaGSE12783 74347293 74348840 1547 0
STAT1 IFNSISSRdata 74347592 74348491 899 0
hScc1 BcellGSE12603 74330774 74331318 544 0
hScc1 BcellGSE12603 74387304 74387664 360 0
hScc1 CdLSGSE12603 74330299 74331489 1190 0
hScc1 G2GSE9613 74330774 74331318 544 0
hScc1 G2GSE9613 74342059 74342970 911 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
14482 EST chr2 74355654 74356347 693 mRNA SLC4A5 chr2 74355024 74478494Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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