AutismKB 2.0

Annotation Detail for PTPRD


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Basic Information Top
Gene Symbol:PTPRD ( HPTP,HPTPD,HPTPDELTA,MGC119750,MGC119751,MGC119752,MGC119753,PTPD,RPTPDELTA )
Gene Full Name: protein tyrosine phosphatase, receptor type, D
Band: 9p24.1-p23
Quick LinksEntrez ID:5789; OMIM: 601598; Uniprot ID:PTPRD_HUMAN; ENSEMBL ID: ENSG00000153707; HGNC ID: 9668
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
254N-linked (GlcNAc...) (Potential).
299N-linked (GlcNAc...) (Potential).
724N-linked (GlcNAc...) (Potential).
832N-linked (GlcNAc...) (Potential).
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001040712
  • Location:chr9 8304246-10602508
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TAF k562GSE8489 8288459 8289067 608 15484
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7c hsa-let-7c 21 17674361
hsa-let-7c* hsa-let-7c 21 17674361
hsa-miR-1 hsa-mir-1-2 18 19586368
hsa-miR-1 hsa-mir-1-1 20 19586368
hsa-miR-125b hsa-mir-125b-1 11 17674361
hsa-miR-125b hsa-mir-125b-2 21 17674361
hsa-miR-125b-2* hsa-mir-125b-2 21 17674361
hsa-miR-133a hsa-mir-133a-1 18 19586368
hsa-miR-133a hsa-mir-133a-2 20 19586368
hsa-miR-133b hsa-mir-133b 6 19586368
hsa-miR-206 hsa-mir-206 6 19586368
hsa-miR-99a hsa-mir-99a 21 17674361
hsa-miR-99a* hsa-mir-99a 21 17674361
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018