Annotation Detail for ACTA1
Basic Information
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| Gene Symbol: | ACTA1 ( ACTA,ASMA,CFTD,CFTD1,CFTDM,MPFD,NEM1,NEM2,NEM3 ) |
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| Gene Full Name: | actin, alpha 1, skeletal muscle |
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| Band: | 1q42.13 |
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| Quick Links | Entrez ID:58; OMIM: 102610; Uniprot ID:ACTS_HUMAN; ENSEMBL ID: ENSG00000143632; HGNC ID: 129 |
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| Relate to Another Database: |
SFARIGene;
denovo-db |
| Location(AA) |
Modification |
|---|
| 3 | N-acetylaspartate (By similarity). |
| 55 | Phosphotyrosine. |
| 63 | N6-acetyllysine. |
| 70 | N6-acetyllysine. |
| 75 | Tele-methylhistidine (By similarity). |
| 93 | Phosphotyrosine. |
| 193 | N6-acetyllysine. |
| 242 | Phosphotyrosine (By similarity). |
| 328 | N6-acetyllysine. |
| 330 | N6-acetyllysine. |
| Location(AA) |
Modifications |
Resource |
| 3 | N-acetylaspartate (By similarity). | Swiss-Prot 53.0 |
| 55 | Phosphotyrosine | Phospho.ELM 6.0 |
| 63 | N6-acetyllysine. | Swiss-Prot 53.0 |
| 75 | Tele-methylhistidine (By similarity). | Swiss-Prot 53.0 |
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
- RefSeq ID: NM_001100
- Location:chr1 227633617-227636465
- strand:-
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
|---|
| H3K27me3 |
colorectal | cancer | 227637597 |
227638926 |
1329 |
1796 |
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
|---|
| CTCF |
G2 | GSE9613 | 227628629 |
227629084 |
455 |
4761 |
| Myc |
K562 | GSE19551 | 227623183 |
227623470 |
287 |
10291 |
| NRSF |
Jurkat | GSE13047 | 227632728 |
227633639 |
911 |
434 |
| NRSF |
Jurkat | SISSRdata | 227633027 |
227633535 |
508 |
337 |
| NRSF |
mAb | Jurkat | 227632032 |
227632713 |
681 |
1245 |
| NRSF-mono |
Jurkat | QuESTdata | 227632903 |
227633565 |
662 |
384 |
| NRSF-poly |
Jurkat | QuESTdata | 227632441 |
227633673 |
1232 |
561 |
| TFAP2C |
MCF7 | GSE21234 | 227614394 |
227614873 |
479 |
18984 |
| TFAP2C |
MCF7 | GSE21234 | 227632980 |
227633503 |
523 |
376 |
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
|---|
| NRSF |
mAb | Jurkat | 227633176 |
227634281 |
1105 |
0 |
| hScc1 |
Bcell | GSE12603 | 227634916 |
227635276 |
360 |
0 |
| Micro RNA Name |
Stem Loop Name |
The chromosome that miRNA located |
Publication |
|---|
| hsa-miR-1 |
hsa-mir-1-2 |
18 |
19004760 |
| hsa-miR-1 |
hsa-mir-1-1 |
20 |
19004760 |
Cis-Nats regulation