Annotation Detail for ABCD3
Basic Information Top
| Gene Symbol: | ABCD3 ( ABC43,PMP70,PXMP1,ZWS2 ) |
|---|---|
| Gene Full Name: | ATP-binding cassette, sub-family D (ALD), member 3 |
| Band: | 1p21.3 |
| Quick Links | Entrez ID:5825; OMIM: 170995; Uniprot ID:ABCD3_HUMAN; ENSEMBL ID: ENSG00000117528; HGNC ID: 67 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 12 | N-linked (GlcNAc...) (Potential). | |
| 106 | N-linked (GlcNAc...) (Potential). | |
| 145 | Phosphotyrosine. | |
| 206 | N-linked (GlcNAc...) (Potential). | |
| 260 | N6-acetyllysine. | |
| 399 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 12 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 106 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 206 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 260 | N6-acetyllysine (By similarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 13 | Phosphoserine(PKG) | HMM predict |
| 14 | Phosphoserine(PKA) | HMM predict |
| 106 | N-linked | HMM predict |
| 206 | N-linked | HMM predict |
| 265 | Phosphotyrosine(SRC) | HMM predict |
| 291 | Phosphothreonine(PKC) | HMM predict |
| 330 | Phosphotyrosine(Jak) | HMM predict |
| 412 | Phosphoserine(ATM) | HMM predict |
| 498 | Phosphothreonine(PKC) | HMM predict |
| 507 | Phosphotyrosine(Jak) | HMM predict |
| 525 | Sulfotyrosine | HMM predict |
| 636 | Phosphotyrosine(Syk) | HMM predict |
- RefSeq ID: NM_002858
- Location:chr1 94656598-94756671
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 94655286 | 94655724 | 438 | 1094 |
| Oct1 | Hela | GSE14283 | 94650618 | 94650654 | 36 | 5963 |
| PHF8 | HeLa | GSE20725 | 94655716 | 94657416 | 1700 | 33 |
| RARA | MCF7 | GSE15244 | 94655286 | 94655724 | 438 | 1094 |
| Rb | Quiescent | GSE19898 | 94655919 | 94656330 | 411 | 474 |
| Rb | Senescent | GSE19898 | 94656025 | 94656604 | 579 | 284 |
| TAF | k562 | GSE8489 | 94655286 | 94655724 | 438 | 1094 |
| p130 | shRbQuiescent | GSE19898 | 94655990 | 94656402 | 412 | 403 |
| p130 | shRbSenescent | GSE19898 | 94655962 | 94656503 | 541 | 366 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct4 | hES | GSE17917 | 94760574 | 94760809 | 235 | 4020 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 94701962 | 94702233 | 271 | 0 |
| CTCF | CD4 | GSE12889 | 94719621 | 94719929 | 308 | 0 |
| CTCF | CD4 | SISSRdata | 94701962 | 94702233 | 271 | 0 |
| CTCF | CD4 | SISSRdata | 94719621 | 94719929 | 308 | 0 |
| CTCF | G2 | GSE9613 | 94702007 | 94702206 | 199 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 94657190 | 94657680 | 490 | 0 |
| H3K4me3 | colorectal | cancer | 94657190 | 94657962 | 772 | 0 |
| H3ac | HepG2 | E | 94657073 | 94658807 | 1734 | 0 |
| H3ac | HepG2 | E | 94659750 | 94660296 | 546 | 0 |
| H3ac | HepG2 | E | 94660665 | 94662041 | 1376 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 94694908 | 94694936 | 28 | 0 |
| Oct1 | Hela | GSE14283 | 94694908 | 94694937 | 29 | 0 |
| Oct1 | Hela | GSE14283 | 94725166 | 94725207 | 41 | 0 |
| Oct1 | Hela | GSE14283 | 94755776 | 94755836 | 60 | 0 |
| RARA | MCF7 | GSE15244 | 94657109 | 94657571 | 462 | 0 |
| TFAP2C | MCF7 | GSE21234 | 94686676 | 94687422 | 746 | 0 |
| TFAP2C | MCF7 | GSE21234 | 94752318 | 94752604 | 286 | 0 |
| hScc1 | Bcell | GSE12603 | 94656418 | 94657026 | 608 | 0 |
| hScc1 | Bcell | GSE12603 | 94701858 | 94702242 | 384 | 0 |
| hScc1 | CdLS | GSE12603 | 94701743 | 94702390 | 647 | 0 |
Validated miRNA targets