Annotation Detail for ABCD4
Basic Information Top
| Gene Symbol: | ABCD4 ( ABC41,EST352188,P70R,P79R,PMP69,PXMP1L ) |
|---|---|
| Gene Full Name: | ATP-binding cassette, sub-family D (ALD), member 4 |
| Band: | 14q24.3 |
| Quick Links | Entrez ID:5826; OMIM: 603214; Uniprot ID:ABCD4_HUMAN; ENSEMBL ID: ENSG00000119688; HGNC ID: 68 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 48 | S-palmitoyl | HMM predict |
| 65 | Phosphoserine(ATM) | HMM predict |
| 93 | N-linked | HMM predict |
| 147 | Phosphoserine(ATM) | HMM predict |
| 201 | N-linked | HMM predict |
| 259 | Phosphothreonine(PKC) | HMM predict |
| 308 | Phosphothreonine(PKC) | HMM predict |
| 544 | Phosphotyrosine(Jak) | HMM predict |
| 593 | S-palmitoyl | HMM predict |
| 603 | Isoleucine | HMM predict |
- RefSeq ID: NM_005050
- Location:chr14 73821732-73839511
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T0-glioblastoma | GSE21026 | 73856475 | 73857065 | 590 | 17259 |
| ER | MCF7 | GSE19013 | 73845172 | 73845690 | 518 | 5920 |
| Oct1 | H2O2-Hela | GSE14283 | 73858920 | 73858999 | 79 | 19448 |
| Oct1 | Hela | GSE14283 | 73858967 | 73858998 | 31 | 19471 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 73814619 | 73815142 | 523 | 6852 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 73827020 | 73827182 | 162 | 0 |
| CTCF | CD4 | SISSRdata | 73827020 | 73827182 | 162 | 0 |
| CTCF | Jurkat | GSE12889 | 73827045 | 73827157 | 112 | 0 |
| CTCF | G2 | GSE9613 | 73824828 | 73825209 | 381 | 0 |
| CTCF | G2 | GSE9613 | 73830823 | 73831325 | 502 | 0 |
| CTCF | G2 | GSE9613 | 73838830 | 73839673 | 843 | 0 |
| ETS1 | Jurkat | GSE17954 | 73838438 | 73839956 | 1518 | 0 |
| H3K4me3 | colorectal | cancer | 73838830 | 73839234 | 404 | 0 |
| H3ac | HepG2 | E | 73838830 | 73839094 | 264 | 0 |
| Oct1 | Hela | GSE14283 | 73839307 | 73839343 | 36 | 0 |
| PHF8 | 293T | GSE20725 | 73838565 | 73840171 | 1606 | 0 |
| PHF8 | HeLa | GSE20725 | 73838947 | 73839702 | 755 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 73838836 | 73839761 | 925 | 0 |
| USF1 | HepG2 | E | 73832275 | 73832822 | 547 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8128 | mRNA | chr14 | 73830509 | 73836519 | 562 | mRNA | ABCD4 | chr14 | 73821880 | 73839420 | Sense/Antisense (SA) pairs | |