AutismKB 2.0

Annotation Detail for RAB3A


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Basic Information Top
Gene Symbol:RAB3A ( - )
Gene Full Name: RAB3A, member RAS oncogene family
Band: 19p13.11
Quick LinksEntrez ID:5864; OMIM: 179490; Uniprot ID:RAB3A_HUMAN; ENSEMBL ID: ENSG00000105649; HGNC ID: 9777
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
37Phosphoserine (By similarity).
59Effector region (By similarity).
188Phosphoserine (By similarity).
220Cysteine methyl ester.
Location(AA) Modifications Resource
37Phosphoserine (By similarity).Swiss-Prot 53.0
188Phosphoserine (By similarity).Swiss-Prot 53.0
218S-geranylgeranyl cysteine.Swiss-Prot 53.0
220Cysteine methyl ester.Swiss-Prot 53.0
220S-geranylgeranyl cysteine.Swiss-Prot 53.0
Location(AA) Modification Resource
30N-linkedHMM predict
188PhosphoserineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002866
  • Location:chr19 18168610-18175838
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 18175650 18176685 1035 329
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF HelaGSE12889 18174583 18174768 185 0
CTCF G2GSE9613 18174414 18174631 217 0
CTCF G2GSE9613 18175081 18175633 552 0
PHF8 293TGSE20725 18175277 18176141 864 0
hScc1 BcellGSE12603 18174279 18174845 566 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
12896 HTC FKSG24 chr19 18165059 18168758 148 mRNA RAB3A chr19 18168610 18175839Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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