Annotation Detail for RAB13
Basic Information Top
| Gene Symbol: | RAB13 ( - ) |
|---|---|
| Gene Full Name: | RAB13, member RAS oncogene family |
| Band: | 1q21.3 |
| Quick Links | Entrez ID:5872; OMIM: 602672; Uniprot ID:RAB13_HUMAN; ENSEMBL ID: ENSG00000143545; HGNC ID: 9762 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 45 | Effector region (By similarity). | |
| 178 | Phosphoserine. | |
| 200 | Cysteine methyl ester (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 200 | S-geranylgeranyl cysteine (Bysimilarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 34 | N-linked | HMM predict |
| 35 | N-linked | HMM predict |
| 37 | Phosphotyrosine(EGFR) | HMM predict |
| 197 | Phosphothreonine(PKC) | HMM predict |
| 200 | Cysteine | HMM predict |
| 200 | S-farnesyl | HMM predict |
- RefSeq ID: NM_002870
- Location:chr1 152220753-152225429
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 152225874 | 152226217 | 343 | 616 |
| CTCF | CD4 | SISSRdata | 152225874 | 152226217 | 343 | 616 |
| CTCF | G2 | GSE9613 | 152225322 | 152225542 | 220 | 3 |
| CTCF | G2 | GSE9613 | 152225820 | 152226254 | 434 | 608 |
| RARA | MCF7 | GSE15244 | 152225722 | 152226287 | 565 | 575 |
| Rb | Quiescent | GSE19898 | 152225795 | 152226072 | 277 | 504 |
| Rb | Senescent | GSE19898 | 152225871 | 152226120 | 249 | 566 |
| Rb | shRbSenescence | GSE19898 | 152225739 | 152226049 | 310 | 465 |
| hScc1 | Bcell | GSE12603 | 152225291 | 152226215 | 924 | 324 |
| hScc1 | CdLS | GSE12603 | 152225581 | 152226287 | 706 | 505 |
| p130 | Quiescent | GSE19898 | 152225879 | 152226157 | 278 | 589 |
| p130 | Senescent | GSE19898 | 152225865 | 152226083 | 218 | 545 |
| p130 | shRbQuiescent | GSE19898 | 152225568 | 152226101 | 533 | 405 |
| p130 | shRbSenescent | GSE19898 | 152225741 | 152226136 | 395 | 509 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Fos | K562 | GSE19551 | 152224329 | 152224829 | 500 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 152224456 | 152225137 | 681 | 0 |
| H3ac | HepG2 | E | 152221228 | 152221824 | 596 | 0 |
| H3ac | HepG2 | E | 152222237 | 152222848 | 611 | 0 |
| H3ac | HepG2 | E | 152223396 | 152223723 | 327 | 0 |
| H3ac | HepG2 | E | 152224275 | 152225291 | 1016 | 0 |
Validated miRNA targets