Annotation Detail for RAB27A
Basic Information Top
| Gene Symbol: | RAB27A ( GS2,HsT18676,MGC117246,RAB27,RAM ) |
|---|---|
| Gene Full Name: | RAB27A, member RAS oncogene family |
| Band: | 15q21.3 |
| Quick Links | Entrez ID:5873; OMIM: 603868; Uniprot ID:RB27A_HUMAN; ENSEMBL ID: ENSG00000069974; HGNC ID: 9766 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 46 | Effector region (By similarity). | |
| 211 | Phosphoserine (By similarity). | |
| 221 | Cysteine methyl ester (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 219 | S-geranylgeranyl cysteine (Bysimilarity). | Swiss-Prot 53.0 |
| 221 | S-geranylgeranyl cysteine (Bysimilarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 6 | Phosphotyrosine(INSR) | HMM predict |
| 133 | N-linked | HMM predict |
| 166 | N-linked | HMM predict |
| 169 | N-linked | HMM predict |
| 219 | S-farnesyl | HMM predict |
- RefSeq ID: NM_183234
- Location:chr15 53283093-53349775
- strand:-
| No data |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 53297170 | 53297396 | 226 | 0 |
| CTCF | CD4 | SISSRdata | 53297170 | 53297396 | 226 | 0 |
| Nanog | hES | GSE18292 | 53297217 | 53297353 | 136 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 53348614 | 53348648 | 34 | 0 |
| Oct1 | Hela | GSE14283 | 53348613 | 53348648 | 35 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 53300196 | 53301418 | 1222 | 0 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 53332117 | 53332154 | 37 | 0 |
| Rb | Growing | GSE19898 | 53300746 | 53301033 | 287 | 0 |
| hScc1 | Bcell | GSE12603 | 53297190 | 53297836 | 646 | 0 |
| hScc1 | CdLS | GSE12603 | 53297190 | 53297836 | 646 | 0 |
| p130 | Quiescent | GSE19898 | 53300538 | 53301081 | 543 | 0 |
| p130 | Senescent | GSE19898 | 53300408 | 53300724 | 316 | 0 |
| p130 | Senescent | GSE19898 | 53300790 | 53301430 | 640 | 0 |
| p130 | shRbQuiescent | GSE19898 | 53300942 | 53301471 | 529 | 0 |
| p130 | shRbSenescent | GSE19898 | 53300863 | 53301193 | 330 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7a | hsa-let-7a-1 | 9 | 19620236 |
| hsa-let-7a | hsa-let-7a-2 | 11 | 19620236 |
| hsa-let-7a | hsa-let-7a-3 | 22 | 19620236 |
| hsa-miR-1 | hsa-mir-1-2 | 18 | 19620236 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 19620236 |
| hsa-miR-122 | hsa-mir-122 | 18 | 19620236 |
| hsa-miR-122* | hsa-mir-122 | 18 | 19620236 |
| hsa-miR-143 | hsa-mir-143 | 5 | 19620236 |
| hsa-miR-143* | hsa-mir-143 | 5 | 19620236 |
| hsa-miR-150 | hsa-mir-150 | 19 | 19620236 |
| hsa-miR-150* | hsa-mir-150 | 19 | 19620236 |
| hsa-miR-191 | hsa-mir-191 | 3 | 19620236 |
| hsa-miR-191* | hsa-mir-191 | 3 | 19620236 |
| No data |
Cis-Nats regulation