Annotation Detail for RAC1
Basic Information Top
| Gene Symbol: | RAC1 ( MGC111543,TC-25,p21-Rac1 ) |
|---|---|
| Gene Full Name: | ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) |
| Band: | 7p22.1 |
| Quick Links | Entrez ID:5879; OMIM: 602048; Uniprot ID:RAC1_HUMAN; ENSEMBL ID: ENSG00000136238; HGNC ID: 9801 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 32 | O-AMP-tyrosine; by Haemophilus IbpA. | |
| 35 | O-AMP-threonine; by Vibrio VopS. | |
| 39 | ADP-ribosylasparagine; by botulinum toxin | |
| 40 | Effector region (Potential). | |
| 71 | Phosphoserine. | |
| 189 | Cysteine methyl ester. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 39 | ADP-ribosylasparagine (by botulinumtoxin) (By similarity). | Swiss-Prot 53.0 |
| 71 | Phosphoserine (PKB | |
| 189 | Cysteine methyl ester. | Swiss-Prot 53.0 |
| 189 | S-geranylgeranyl cysteine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 32 | Phosphotyrosine(Jak) | HMM predict |
| 64 | Phosphotyrosine(Syk) | HMM predict |
| 86 | Phosphoserine(MAPK) | HMM predict |
| 181 | Proline | HMM predict |
| 186 | Lysine | HMM predict |
| 189 | S-farnesyl | HMM predict |
- RefSeq ID: NM_006908
- Location:chr7 6380650-6410121
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Myc | K562 | GSE19551 | 6374018 | 6374392 | 374 | 6446 |
| PHF8 | Hs68minusFBS | GSE20725 | 6380133 | 6380645 | 512 | 262 |
| STAT1 | HeLa | GSE12783 | 6373623 | 6374809 | 1186 | 6435 |
| STAT1 | IFN | SISSRdata | 6373661 | 6374709 | 1048 | 6466 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 6380545 | 6381289 | 744 | 0 |
| CTCF | G2 | GSE9613 | 6402196 | 6402460 | 264 | 0 |
| ETS1 | Jurkat | GSE17954 | 6380236 | 6381291 | 1055 | 0 |
| FoxA1 | MCF7 | MACSdata | 6398744 | 6399163 | 419 | 0 |
| H3K4me3 | colorectal | cancer | 6381916 | 6382307 | 391 | 0 |
| H3ac | HepG2 | E | 6381689 | 6382307 | 618 | 0 |
| Myc | K562 | GSE19551 | 6399113 | 6399944 | 831 | 0 |
| Oct1 | Hela | GSE14283 | 6388130 | 6388173 | 43 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 6391164 | 6392501 | 1337 | 0 |
| PHF8 | HeLa | GSE20725 | 6380036 | 6381542 | 1506 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 6380204 | 6381288 | 1084 | 0 |
| TAF | Hela | GSE8489 | 6381748 | 6382307 | 559 | 0 |
| TAF | k562 | GSE8489 | 6381689 | 6382307 | 618 | 0 |
| hScc1 | G2 | GSE9613 | 6380412 | 6381152 | 740 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-122 | hsa-mir-122 | 18 | 19935707 |
| hsa-miR-122* | hsa-mir-122 | 18 | 19935707 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 18619591 |
| hsa-miR-124 | hsa-mir-124-2 | 8 | 18619591 |
| hsa-miR-124 | hsa-mir-124-3 | 20 | 18619591 |
| hsa-miR-132 | hsa-mir-132 | 17 | 19850129 |
| hsa-miR-132* | hsa-mir-132 | 17 | 19850129 |
| hsa-miR-150 | hsa-mir-150 | 19 | 19892940 |
| hsa-miR-150* | hsa-mir-150 | 19 | 19892940 |
| hsa-miR-151-3p | hsa-mir-151 | 8 | 20812359 |
| hsa-miR-151-3p | hsa-mir-151 | 8 | 20305651 |
| hsa-miR-151-5p | hsa-mir-151 | 8 | 20812359 |
| hsa-miR-151-5p | hsa-mir-151 | 8 | 20305651 |
| hsa-miR-182 | hsa-mir-182 | 7 | 20490652 |
| hsa-miR-182* | hsa-mir-182 | 7 | 20490652 |
| hsa-miR-194 | hsa-mir-194-1 | 1 | 19892940 |
| hsa-miR-194 | hsa-mir-194-2 | 11 | 19892940 |
| hsa-miR-30c | hsa-mir-30c-2 | 6 | 20490652 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 20490652 |
| No data |
Cis-Nats regulation