AutismKB 2.0

Annotation Detail for RAD52


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Basic Information Top
Gene Symbol:RAD52 ( - )
Gene Full Name: RAD52 homolog (S. cerevisiae)
Band: 12p13.33
Quick LinksEntrez ID:5893; OMIM: 600392; Uniprot ID:RAD52_HUMAN; ENSEMBL ID: ENSG00000002016; HGNC ID: 9824
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2Phosphoserine.
199Phosphoserine.
318Phosphothreonine.
335Phosphothreonine.
Location(AA) Modifications Resource
104Phosphotyrosine (Abl)Phospho.ELM 6.0
Location(AA) Modification Resource
171Phosphotyrosine(Jak)HMM predict
199Phosphoserine(CK2)HMM predict
199Phosphoserine(CK1)HMM predict
224Phosphoserine(CDK)HMM predict
224Phosphoserine(CDC2)HMM predict
226O-linkedHMM predict
241Phosphoserine(CK1)HMM predict
245Phosphoserine(CK1)HMM predict
247Phosphoserine(IKK)HMM predict
280Phosphoserine(PKG)HMM predict
281Phosphothreonine(MAPK)HMM predict
287Phosphoserine(IKK)HMM predict
299O-linkedHMM predict
303O-linkedHMM predict
329Phosphoserine(CK1)HMM predict
354Phosphothreonine(PKC)HMM predict
368N-linkedHMM predict
370Phosphothreonine(MAPK)HMM predict
373Phosphoserine(IKK)HMM predict
385Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_134424
  • Location:chr12 891515-929123
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 929221 929605 384 290
CTCF CD4SISSRdata 929221 929605 384 290
FoxA1 MCF7MACSdata 930680 930905 225 1669
Oct4 hESGSE17917 929257 929724 467 367
PHF8 Hs68plusFBSGSE20725 928406 930033 1627 96
Rb GrowingGSE19898 929114 929525 411 196
Rb QuiescentGSE19898 928882 929588 706 112
Rb SenescentGSE19898 928817 929575 758 73
Rb shRbQuiescentGSE19898 929310 929514 204 289
Rb shRbSenescenceGSE19898 929232 929459 227 222
hScc1 BcellGSE12603 928898 929686 788 169
hScc1 CdLSGSE12603 928595 929686 1091 17
hScc1 G2GSE9613 929135 929686 551 287
p130 QuiescentGSE19898 929095 929682 587 265
p130 shRbQuiescentGSE19898 929178 929831 653 381
p130 shRbSenescentGSE19898 929088 929748 660 295
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 928325 929642 1317 0
PHF8 293TGSE20725 928503 929407 904 0
PHF8 HeLaGSE20725 928010 929529 1519 0
RARG MCF7GSE15244 928595 929046 451 0
Rb GrowingGSE19898 928652 928886 234 0
TFAP2C MCF7GSE21234 928650 929550 900 0
VDR GM10861-UnstimGSE22484 928175 929902 1727 0
p130 QuiescentGSE19898 928800 929019 219 0
p130 SenescentGSE19898 928545 929675 1130 0
p130 shRbQuiescentGSE19898 928721 929084 363 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-210 hsa-mir-210 11 19141645
hsa-miR-373 hsa-mir-373 19 19141645
hsa-miR-373* hsa-mir-373 19 19141645
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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