AutismKB 2.0

Annotation Detail for RALA


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Basic Information Top
Gene Symbol:RALA ( MGC48949,RAL )
Gene Full Name: v-ral simian leukemia viral oncogene homolog A (ras related)
Band: 7p14.1
Quick LinksEntrez ID:5898; OMIM: 179550; Uniprot ID:RALA_HUMAN; ENSEMBL ID: ENSG00000006451; HGNC ID: 9839
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
51Effector region (By similarity).
203Cysteine methyl ester.
Location(AA) Modifications Resource
203Cysteine methyl ester (Probable).Swiss-Prot 53.0
203S-geranylgeranyl cysteine.Swiss-Prot 53.0
Location(AA) Modification Resource
50Phosphoserine(PKC)HMM predict
75Phosphotyrosine(Syk)HMM predict
127N-linkedHMM predict
138Phosphoserine(PKG)HMM predict
138Phosphoserine(CAMK2)HMM predict
199IsoleucineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005402
  • Location:chr7 39629686-39714239
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
GABP k562GSE8489 39628099 39629280 1181 997
H3K4me3 colorectalcancer 39628489 39629215 726 835
H3ac HepG2E 39628255 39629344 1089 887
Oct1 HelaGSE14283 39625331 39625360 29 4341
Oct4 hESGSE17917 39629543 39629825 282 3
PHF8 293TGSE20725 39629001 39630205 1204 84
PHF8 HeLaGSE20725 39628735 39630443 1708 98
STAT1 HeLaGSE12782 39613950 39615190 1240 15117
p130 shRbQuiescentGSE19898 39628788 39629658 870 464
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Myc K562GSE19551 39728022 39728763 741 14153
Nanog hESGSE18292 39729508 39729896 388 15463
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 39629058 39630448 1390 0
ER MCF7GSE19013 39629881 39630528 647 0
GABP k562GSE8489 39630311 39632623 2312 0
H3ac HepG2E 39630448 39631841 1393 0
Nanog hESGSE18292 39672791 39673136 345 0
Sox2 hESGSE18292 39672766 39673092 326 0
TAF k562GSE8489 39630380 39631841 1461 0
hScc1 BcellGSE12603 39629101 39630347 1246 0
hScc1 G2GSE9613 39629025 39630668 1643 0
p63 keratinocytesGSE17611 39706051 39706966 915 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-181a hsa-mir-181a-2 9 16762861
hsa-miR-181a hsa-mir-181a-1 1 16762861
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
23897 mRNA RALA chr7 39436401 39520955 682 EST chr7 39458326 39459008 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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