AutismKB 2.0

Annotation Detail for RANGAP1


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Basic Information Top
Gene Symbol:RANGAP1 ( Fug1,KIAA1835,MGC20266,SD )
Gene Full Name: Ran GTPase activating protein 1
Band: 22q13.2
Quick LinksEntrez ID:5905; OMIM: 602362; Uniprot ID:RAGP1_HUMAN; ENSEMBL ID: ENSG00000100401; HGNC ID: 9854
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
409Phosphothreonine; by CDK2.
428Phosphoserine.
435Phosphoserine.
436Phosphothreonine.
442Phosphoserine.
524N6-acetyllysine.
526SUMO conjugation.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002883
  • Location:chr22 39971560-40012161
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 40011484 40013308 1824 235
FOXA1 MCF7GSE15244 40014111 40014837 726 2313
Nanog hESGSE18292 40016488 40016937 449 4551
PHF8 293TGSE20725 40011498 40013082 1584 129
hScc1 BcellGSE12603 40011883 40012517 634 39
p130 QuiescentGSE19898 40012024 40012357 333 29
p130 shRbQuiescentGSE19898 40016725 40017129 404 4766
p130 shRbSenescentGSE19898 40012009 40012580 571 133
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF JurkatGSE12889 39972120 39972276 156 0
CTCF G2GSE9613 39971405 39972513 1108 0
CTCF G2GSE9613 39983764 39984088 324 0
CTCF G2GSE9613 39986183 39986483 300 0
CTCF G2GSE9613 39988264 39988717 453 0
CTCF G2GSE9613 40011149 40011763 614 0
FOXA1 MCF7GSE15244 39981929 39983393 1464 0
FoxA1 MCF7MACSdata 39982351 39982536 185 0
H3ac HepG2E 40011149 40011467 318 0
KLF4 hESGSE17917 39997702 39997927 225 0
LIN9 G0GSE7516 40011396 40012561 1165 0
LIN9 SGSE7516 40011149 40012598 1449 0
Myc hESGSE17917 40011888 40012219 331 0
P300 T30-glioblastomaGSE21026 39982161 39982629 468 0
PHF8 HeLaGSE20725 40011348 40012926 1578 0
TFAP2C MCF7GSE21234 39982149 39982724 575 0
TFAP2C MCF7GSE21234 39991311 39991831 520 0
hScc1 BcellGSE12603 39974165 39974718 553 0
hScc1 BcellGSE12603 39988156 39988786 630 0
p130 SenescentGSE19898 40011316 40012630 1314 0
p130 G0GSE7516 40011467 40012561 1094 0
p63 keratinocytesGSE17611 40005895 40006741 846 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
17521 mRNA RoXaN chr22 40022066 40080651 1397 mRNA RANGAP1 chr22 39966114 40023463 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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