AutismKB 2.0

Annotation Detail for RAP1GAP


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Basic Information Top
Gene Symbol:RAP1GAP ( KIAA0474,RAP1GA1,RAP1GAP1,RAP1GAPII,RAPGAP )
Gene Full Name: RAP1 GTPase activating protein
Band: 1p36.12
Quick LinksEntrez ID:5909; OMIM: 600278; Uniprot ID:RPGP1_HUMAN; ENSEMBL ID: ENSG00000076864; HGNC ID: 9858
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
262N6-acetyllysine.
384N6-acetyllysine.
441Phosphoserine.
484Phosphoserine.
499Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002885
  • Location:chr1 21795301-21868385
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
hScc1 BcellGSE12603 21867962 21869065 1103 128
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 21794740 21794956 216 454
CTCF CD4SISSRdata 21794740 21794956 216 454
CTCF G2GSE9613 21787131 21787451 320 8011
CTCF G2GSE9613 21789356 21789673 317 5787
CTCF G2GSE9613 21794329 21794812 483 731
NRSF JurkatGSE13047 21793348 21793995 647 1630
NRSF-mono JurkatQuESTdata 21793421 21794012 591 1585
NRSF-poly JurkatQuESTdata 21793394 21793882 488 1664
TFAP2C MCF7GSE21234 21793676 21794183 507 1372
hScc1 BcellGSE12603 21791378 21791846 468 3690
hScc1 BcellGSE12603 21794123 21794812 689 834
hScc1 CdLSGSE12603 21794555 21794812 257 618
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 21837589 21838312 723 0
CBP T30-glioblastomaGSE21026 21837282 21838432 1150 0
CTCF HelaGSE12889 21854934 21855097 163 0
CTCF HelaGSE12889 21858276 21858423 147 0
CTCF G2GSE9613 21798427 21798784 357 0
CTCF G2GSE9613 21802423 21802864 441 0
CTCF G2GSE9613 21803581 21803777 196 0
CTCF G2GSE9613 21804170 21804567 397 0
CTCF G2GSE9613 21806739 21807091 352 0
CTCF G2GSE9613 21810412 21810676 264 0
CTCF G2GSE9613 21812499 21812793 294 0
CTCF G2GSE9613 21817814 21818216 402 0
CTCF G2GSE9613 21820329 21821473 1144 0
CTCF G2GSE9613 21828580 21828712 132 0
CTCF G2GSE9613 21832076 21832517 441 0
CTCF G2GSE9613 21838056 21838424 368 0
CTCF G2GSE9613 21841334 21841815 481 0
CTCF G2GSE9613 21847957 21848209 252 0
CTCF G2GSE9613 21850254 21850701 447 0
CTCF G2GSE9613 21852383 21852935 552 0
CTCF G2GSE9613 21858303 21858774 471 0
CTCF G2GSE9613 21859861 21860025 164 0
CTCF G2GSE9613 21862432 21862774 342 0
CTCF G2GSE9613 21868004 21868266 262 0
FOXA1 MCF7GSE15244 21832923 21834200 1277 0
Fos K562GSE19551 21837475 21838872 1397 0
FoxA1 MCF7MACSdata 21833436 21833591 155 0
Gata2 K562GSE18868 21830905 21831961 1056 0
Myc K562GSE19551 21817941 21818594 653 0
Myc K562GSE19551 21846824 21847379 555 0
NRSF JurkatGSE13047 21846430 21848406 1976 0
NRSF JurkatGSE13047 21857822 21859412 1590 0
NRSF mAbJurkat 21840310 21840745 435 0
NRSF mAbJurkat 21841334 21842319 985 0
NRSF mAbJurkat 21842705 21843396 691 0
NRSF mAbJurkat 21845274 21846270 996 0
NRSF mAbJurkat 21846608 21847225 617 0
NRSF mAbJurkat 21847704 21849024 1320 0
NRSF mAbJurkat 21853136 21853379 243 0
NRSF mAbJurkat 21854572 21855041 469 0
NRSF mAbJurkat 21855543 21857021 1478 0
NRSF-mono JurkatQuESTdata 21846378 21848405 2027 0
NRSF-mono JurkatQuESTdata 21857848 21859310 1462 0
NRSF-poly JurkatQuESTdata 21846436 21848418 1982 0
NRSF-poly JurkatQuESTdata 21858148 21859415 1267 0
P300 T0-glioblastomaGSE21026 21837560 21838185 625 0
P300 T30-glioblastomaGSE21026 21837413 21838898 1485 0
PHF8 293TGSE20725 21821531 21822082 551 0
RARA MCF7GSE15244 21832923 21834009 1086 0
RARA MCF7GSE15244 21838056 21838460 404 0
RARA MCF7GSE15244 21854572 21854993 421 0
RARG MCF7GSE15244 21832959 21834237 1278 0
TFAP2C MCF7GSE21234 21806684 21807289 605 0
TFAP2C MCF7GSE21234 21822748 21823111 363 0
TFAP2C MCF7GSE21234 21825229 21826564 1335 0
TFAP2C MCF7GSE21234 21832922 21834329 1407 0
hScc1 BcellGSE12603 21796526 21796905 379 0
hScc1 BcellGSE12603 21798318 21798784 466 0
hScc1 BcellGSE12603 21804170 21804567 397 0
hScc1 BcellGSE12603 21806739 21807522 783 0
hScc1 BcellGSE12603 21819537 21820018 481 0
hScc1 BcellGSE12603 21821253 21822163 910 0
hScc1 BcellGSE12603 21826156 21826444 288 0
hScc1 BcellGSE12603 21829984 21830387 403 0
hScc1 BcellGSE12603 21847957 21848209 252 0
hScc1 BcellGSE12603 21858303 21858739 436 0
hScc1 BcellGSE12603 21864846 21865522 676 0
hScc1 CdLSGSE12603 21858303 21859319 1016 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
349 EST chr1 21706807 21709781 2974 mRNA RAP1GA1 chr1 21668020 21741105 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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