Annotation Detail for RAP1GDS1
Basic Information Top
| Gene Symbol: | RAP1GDS1 ( GDS1,MGC118859,MGC118861,SmgGDS ) |
|---|---|
| Gene Full Name: | RAP1, GTP-GDP dissociation stimulator 1 |
| Band: | 4q23 |
| Quick Links | Entrez ID:5910; OMIM: 179502; Uniprot ID:GDS1_HUMAN; ENSEMBL ID: ENSG00000138698; HGNC ID: 9859 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 230 | N6-acetyllysine. | |
| 421 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 37 | N-linked | HMM predict |
| 38 | N-linked | HMM predict |
| 59 | Phosphothreonine(MAPK) | HMM predict |
| 59 | Phosphothreonine(CDK) | HMM predict |
| 92 | Phosphoserine(MAPK) | HMM predict |
| 164 | N-linked | HMM predict |
| 167 | N-linked | HMM predict |
| 169 | N-linked | HMM predict |
| 199 | Phosphothreonine(PKC) | HMM predict |
| 214 | Phosphoserine(CK1) | HMM predict |
| 215 | Phosphoserine(CK1) | HMM predict |
| 280 | Phosphoserine(CK2) | HMM predict |
| 374 | N-linked | HMM predict |
| 497 | Phosphothreonine(PKA) | HMM predict |
| 547 | Phosphoserine(CK1) | HMM predict |
| 597 | Phosphoserine(IKK) | HMM predict |
- RefSeq ID: NM_021159
- Location:chr4 99401642-99582837
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 99400374 | 99401859 | 1485 | 526 |
| ER | E2-MCF7 | GSE14664 | 99382294 | 99382342 | 48 | 19325 |
| ER | Fulvestrant-MCF7 | GSE14664 | 99389307 | 99389354 | 47 | 12312 |
| ER | Fulvestrant-MCF7 | GSE14664 | 99396787 | 99396822 | 35 | 4838 |
| H3K4me3 | colorectal | cancer | 99400008 | 99400489 | 481 | 1394 |
| H3ac | HepG2 | E | 99400008 | 99401108 | 1100 | 1085 |
| Oct1 | H2O2-Hela | GSE14283 | 99389305 | 99389351 | 46 | 12315 |
| Oct1 | H2O2-Hela | GSE14283 | 99400704 | 99400741 | 37 | 920 |
| Oct1 | Hela | GSE14283 | 99389300 | 99389350 | 50 | 12318 |
| Oct1 | Hela | GSE14283 | 99400703 | 99400741 | 38 | 921 |
| PHF8 | 293T | GSE20725 | 99400424 | 99402217 | 1793 | 322 |
| PHF8 | HeLa | GSE20725 | 99400377 | 99402495 | 2118 | 207 |
| PHF8 | Hs68plusFBS | GSE20725 | 99400210 | 99402619 | 2409 | 228 |
| hScc1 | Bcell | GSE12603 | 99400628 | 99402294 | 1666 | 182 |
| p130 | Quiescent | GSE19898 | 99400970 | 99401416 | 446 | 450 |
| p130 | Senescent | GSE19898 | 99400878 | 99401432 | 554 | 488 |
| p130 | shRbQuiescent | GSE19898 | 99400685 | 99401445 | 760 | 578 |
| p130 | shRbSenescent | GSE19898 | 99400928 | 99401266 | 338 | 546 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 99587775 | 99588115 | 340 | 5108 |
| CTCF | G2 | GSE9613 | 99589054 | 99589531 | 477 | 6455 |
| hScc1 | Bcell | GSE12603 | 99587932 | 99588151 | 219 | 5204 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K4me3 | colorectal | cancer | 99402156 | 99402529 | 373 | 0 |
| H3ac | HepG2 | E | 99402120 | 99403131 | 1011 | 0 |
| Nanog | ES | GSE20650 | 99424761 | 99425327 | 566 | 0 |
| Nanog | hES | GSE18292 | 99474757 | 99475046 | 289 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 99430522 | 99430560 | 38 | 0 |
| Oct1 | Hela | GSE14283 | 99430522 | 99430560 | 38 | 0 |
| Oct1 | Hela | GSE14283 | 99451139 | 99451165 | 26 | 0 |
| Oct1 | Hela | GSE14283 | 99456621 | 99456658 | 37 | 0 |
| Oct1 | Hela | GSE14283 | 99473600 | 99473628 | 28 | 0 |
| Oct1 | Hela | GSE14283 | 99488173 | 99488210 | 37 | 0 |
| Oct1 | Hela | GSE14283 | 99527890 | 99527918 | 28 | 0 |
| Oct1 | Hela | GSE14283 | 99531558 | 99531595 | 37 | 0 |
| Rb | shRbSenescence | GSE19898 | 99563417 | 99563592 | 175 | 0 |
| p130 | Quiescent | GSE19898 | 99402100 | 99402328 | 228 | 0 |
| p130 | shRbSenescent | GSE19898 | 99401978 | 99402478 | 500 | 0 |
Validated miRNA targets