Annotation Detail for RBBP5
Basic Information Top
| Gene Symbol: | RBBP5 ( RBQ3,SWD1 ) |
|---|---|
| Gene Full Name: | retinoblastoma binding protein 5 |
| Band: | 1q32.1 |
| Quick Links | Entrez ID:5929; OMIM: 600697; Uniprot ID:RBBP5_HUMAN; ENSEMBL ID: ENSG00000117222; HGNC ID: 9888 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 182 | Phosphoserine. | |
| 193 | Phosphothreonine. | |
| 252 | Phosphothreonine; by CDK1. | |
| 281 | N6-acetyllysine. | |
| 350 | Phosphoserine. | |
| 388 | Phosphoserine. | |
| 389 | Phosphoserine. | |
| 497 | Phosphoserine; by CDK1. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 252 | Phosphothreonine (by CDC2). | Swiss-Prot 53.0 |
| 350 | Phosphoserine. | Swiss-Prot 53.0 |
| 388 | Phosphoserine. | Swiss-Prot 53.0 |
| 389 | Phosphoserine. | Swiss-Prot 53.0 |
| 497 | Phosphoserine (by CDC2). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 37 | Phosphothreonine(PKC) | HMM predict |
| 138 | Phosphoserine(ATM) | HMM predict |
| 192 | O-linked | HMM predict |
| 197 | N-linked | HMM predict |
| 198 | O-linked | HMM predict |
| 199 | O-linked | HMM predict |
| 250 | N-linked | HMM predict |
| 252 | Phosphothreonine(CDC2) | HMM predict |
| 265 | Phosphotyrosine(INSR) | HMM predict |
| 328 | N-linked | HMM predict |
| 345 | Phosphotyrosine(Syk) | HMM predict |
| 360 | Phosphoserine(CK1) | HMM predict |
| 365 | Phosphothreonine(CK2) | HMM predict |
| 388 | Phosphoserine(CK2) | HMM predict |
| 416 | Phosphotyrosine(Syk) | HMM predict |
| 416 | Phosphotyrosine(Abl) | HMM predict |
| 416 | Phosphotyrosine(SRC) | HMM predict |
| 440 | Phosphoserine(PKC) | HMM predict |
| 441 | Phosphoserine(IKK) | HMM predict |
| 441 | Phosphoserine(CAMK2) | HMM predict |
| 445 | Phosphoserine(ATM) | HMM predict |
| 445 | Phosphoserine(IKK) | HMM predict |
| 497 | Phosphoserine(CDC2) | HMM predict |
| 505 | O-linked | HMM predict |
| 525 | Phosphoserine(ATM) | HMM predict |
- RefSeq ID: NM_005057
- Location:chr1 203322601-203357753
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 203357979 | 203358273 | 294 | 373 |
| CTCF | CD4 | SISSRdata | 203357979 | 203358273 | 294 | 373 |
| CTCF | G2 | GSE9613 | 203357431 | 203358485 | 1054 | 205 |
| ETS1 | Jurkat | GSE17954 | 203357312 | 203358555 | 1243 | 180 |
| GABP | k562 | GSE8489 | 203356547 | 203359087 | 2540 | 64 |
| H3K4me3 | colorectal | cancer | 203358337 | 203358752 | 415 | 791 |
| H3ac | HepG2 | E | 203358221 | 203359087 | 866 | 901 |
| LIN9 | S | GSE7516 | 203357637 | 203358186 | 549 | 158 |
| P300 | T30-glioblastoma | GSE21026 | 203357113 | 203358422 | 1309 | 14 |
| PHF8 | 293T | GSE20725 | 203357176 | 203358491 | 1315 | 80 |
| RARG | MCF7 | GSE15244 | 203357212 | 203358819 | 1607 | 262 |
| TAF | k562 | GSE8489 | 203356547 | 203359087 | 2540 | 64 |
| hScc1 | Bcell | GSE12603 | 203357900 | 203358186 | 286 | 290 |
| hScc1 | CdLS | GSE12603 | 203357789 | 203358411 | 622 | 347 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| GABP | k562 | GSE8489 | 203355821 | 203356239 | 418 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 203355458 | 203356239 | 781 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 203356547 | 203357466 | 919 | 0 |
| H3K4me3 | colorectal | cancer | 203356547 | 203357637 | 1090 | 0 |
| H3ac | HepG2 | E | 203355179 | 203356215 | 1036 | 0 |
| H3ac | HepG2 | E | 203356547 | 203357864 | 1317 | 0 |
| PHF8 | HeLa | GSE20725 | 203357224 | 203358281 | 1057 | 0 |
| RARA | MCF7 | GSE15244 | 203356673 | 203358819 | 2146 | 0 |
| TAF | Hela | GSE8489 | 203356547 | 203358722 | 2175 | 0 |
| TAF | k562 | GSE8489 | 203355179 | 203356239 | 1060 | 0 |
Validated miRNA targets