Annotation Detail for RBMS1
Basic Information Top
| Gene Symbol: | RBMS1 ( C2orf12,DKFZp564H0764,HCC-4,MGC15146,MGC3331,MGC70597,MGC97258,MGC97270,MGC97282,MGC99543,MSSP,MSSP-1,MSSP-2,MSSP-3,SCR2,YC1 ) |
|---|---|
| Gene Full Name: | RNA binding motif, single stranded interacting protein 1 |
| Band: | 2q24.2 |
| Quick Links | Entrez ID:5937; OMIM: 602310; Uniprot ID:RBMS1_HUMAN; ENSEMBL ID: ENSG00000153250; HGNC ID: 9907 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 112 | Phosphoserine. | |
| 208 | Phosphothreonine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 18 | Sulfotyrosine | HMM predict |
| 27 | Phosphoserine(PKG) | HMM predict |
| 38 | O-linked | HMM predict |
| 38 | Phosphoserine(IKK) | HMM predict |
| 41 | O-linked | HMM predict |
| 42 | O-linked | HMM predict |
| 43 | Phosphoserine(IKK) | HMM predict |
| 44 | Phosphoserine(IKK) | HMM predict |
| 46 | N-linked | HMM predict |
| 47 | N-linked | HMM predict |
| 51 | Phosphoserine(CK1) | HMM predict |
| 52 | Phosphoserine(CK1) | HMM predict |
| 53 | N-linked | HMM predict |
| 151 | Phosphoserine(MAPK) | HMM predict |
| 237 | Phosphotyrosine(INSR) | HMM predict |
| 262 | O-linked | HMM predict |
| 273 | Phosphoserine(CDC2) | HMM predict |
| 273 | Phosphoserine(ATM) | HMM predict |
| 276 | Phosphoserine(IKK) | HMM predict |
| 294 | Phosphoserine(MAPK) | HMM predict |
| 294 | Phosphoserine(CDC2) | HMM predict |
| 322 | Phosphothreonine(MAPK) | HMM predict |
| 338 | Phosphoserine(MAPK) | HMM predict |
| 354 | O-linked | HMM predict |
| 355 | Phosphotyrosine(INSR) | HMM predict |
| 355 | Phosphotyrosine(SRC) | HMM predict |
| 360 | O-linked | HMM predict |
| 366 | Phosphotyrosine(Jak) | HMM predict |
| 370 | Phosphotyrosine(INSR) | HMM predict |
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7b | hsa-let-7b | 22 | 18668040 |
| hsa-let-7b* | hsa-let-7b | 22 | 18668040 |
| hsa-miR-1 | hsa-mir-1-2 | 18 | 15685193 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 15685193 |
| hsa-miR-1 | hsa-mir-1-2 | 18 | 18668040 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 18668040 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-2 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-3 | 20 | 15685193 |
| hsa-miR-155 | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-155* | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-16 | hsa-mir-16-1 | 13 | 18668040 |
| hsa-miR-16 | hsa-mir-16-2 | 3 | 18668040 |
| hsa-miR-30a | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30b | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30b* | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-1* | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-2* | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30d | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30d* | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30e | hsa-mir-30e | 1 | 18668040 |
| hsa-miR-30e* | hsa-mir-30e | 1 | 18668040 |
| hsa-miR-373 | hsa-mir-373 | 19 | 15685193 |
| hsa-miR-373* | hsa-mir-373 | 19 | 15685193 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 261 | Unknown | MicroArray | miR-124 | RBMS1 | n_a | 15685193 |
| 1272 | Unknown | pSILAC | miR-30 | RBMS1 | down 50-25% | 18668040 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000153250 | G1-to-S transition | n_a | n_a | "lymphocyte, macrophage, muscle cell" | "benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma" | |
| ENSG00000153250 | n_a | n_a | n_a | "lymphocyte, macrophage, muscle cell" | "benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma" |