AutismKB 2.0

Annotation Detail for FAM3A


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Basic Information Top
Gene Symbol:FAM3A ( 2.19,DLD,DXS560S,XAP-7 )
Gene Full Name: family with sequence similarity 3, member A
Band: Xq28
Quick LinksEntrez ID:60343; OMIM: 300492; Uniprot ID:FAM3A_HUMAN; ENSEMBL ID: ENSG00000071889; HGNC ID: 13749
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
43Phosphoserine(CDC2)HMM predict
43Phosphoserine(MAPK)HMM predict
43Phosphoserine(CDK)HMM predict
46O-linkedHMM predict
47O-linkedHMM predict
47Phosphoserine(CK1)HMM predict
49O-linkedHMM predict
193N-linkedHMM predict
195Phosphoserine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_021806
  • Location:chrX 153387699-153397566
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 153397408 153398044 636 160
CTCF G2GSE9613 153398717 153398866 149 1225
PHF8 293TGSE20725 153397178 153398650 1472 348
PHF8 HeLaGSE20725 153397090 153398402 1312 180
PHF8 Hs68plusFBSGSE20725 153397159 153398173 1014 100
USF1 HepG2E 153398145 153399084 939 1048
hScc1 G2GSE9613 153397553 153398044 491 232
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 153384099 153384320 221 3490
Oct1 HelaGSE14283 153384257 153384290 33 3426
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 153387598 153388215 617 0
CTCF G2GSE9613 153388489 153389358 869 0
CTCF G2GSE9613 153389775 153390526 751 0
ER E2-MCF7GSE14664 153397044 153397080 36 0
Oct1 HelaGSE14283 153397031 153397077 46 0
VDR GM10861-stimGSE22484 153396514 153397538 1024 0
hScc1 G2GSE9613 153389739 153390526 787 0
hScc1 G2GSE9613 153394176 153394808 632 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018