AutismKB 2.0

Annotation Detail for CELF5


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Basic Information Top
Gene Symbol:CELF5 ( BRUNOL-5,BRUNOL5 )
Gene Full Name: CUGBP, Elav-like family member 5
Band: 19p13.3
Quick LinksEntrez ID:60680; OMIM: 612680; Uniprot ID:CELF5_HUMAN; ENSEMBL ID: ENSG00000161082; HGNC ID: 14058
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_021938
  • Location:chr19 3175700-3248070
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 3175484 3175643 159 137
CTCF CD4SISSRdata 3175484 3175643 159 137
CTCF JurkatGSE12889 3175378 3175677 299 173
H3K27me3 colorectalcancer 3173718 3173962 244 1861
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 3252163 3252708 545 4365
CTCF CD4GSE12889 3256027 3256270 243 8078
CTCF CD4SISSRdata 3256027 3256270 243 8078
CTCF HelaGSE12889 3256025 3256214 189 8049
CTCF JurkatGSE12889 3259162 3259378 216 11200
CTCF G2GSE9613 3256073 3256411 338 8172
CTCF G2GSE9613 3259111 3259386 275 11178
NRSF JurkatGSE13047 3258216 3258818 602 10447
NRSF mAbJurkat 3257491 3257941 450 9646
NRSF mAbJurkat 3258285 3258701 416 10423
NRSF mAbJurkat 3259053 3259386 333 11149
NRSF mAbJurkat 3259868 3260062 194 11895
NRSF-mono JurkatQuESTdata 3258221 3258804 583 10442
NRSF-poly JurkatQuESTdata 3258274 3258742 468 10438
hScc1 BcellGSE12603 3256073 3256411 338 8172
hScc1 BcellGSE12603 3259172 3259386 214 11209
hScc1 CdLSGSE12603 3256073 3256411 338 8172
hScc1 G2GSE9613 3256073 3256411 338 8172
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 3201819 3201993 174 0
CTCF CD4SISSRdata 3201819 3201993 174 0
CTCF HelaGSE12889 3226507 3226693 186 0
CTCF JurkatGSE12889 3226462 3226739 277 0
CTCF G2GSE9613 3175461 3175974 513 0
CTCF G2GSE9613 3185609 3185911 302 0
CTCF G2GSE9613 3226225 3226914 689 0
CTCF G2GSE9613 3242602 3242816 214 0
Fos K562GSE19551 3200387 3200759 372 0
H3K27me3 colorectalcancer 3177341 3178093 752 0
Myc K562GSE19551 3204229 3204676 447 0
NRSF JurkatGSE13047 3194464 3196370 1906 0
NRSF mAbJurkat 3186130 3186460 330 0
NRSF mAbJurkat 3186932 3187486 554 0
NRSF mAbJurkat 3190598 3190982 384 0
NRSF mAbJurkat 3191640 3192035 395 0
NRSF mAbJurkat 3192381 3192743 362 0
NRSF mAbJurkat 3196432 3196771 339 0
NRSF-mono JurkatQuESTdata 3194356 3196709 2353 0
NRSF-poly JurkatQuESTdata 3194464 3196644 2180 0
Oct1 H2O2-HelaGSE14283 3182697 3182736 39 0
Oct1 HelaGSE14283 3182698 3182734 36 0
SRF GMOGSE8489 3228708 3229526 818 0
SRF HepG2GSE8489 3228708 3229526 818 0
STAT1 HeLaGSE12782 3215988 3217108 1120 0
STAT1 HeLaGSE12783 3215988 3217108 1120 0
TFAP2C MCF7GSE21234 3241043 3241593 550 0
USF1 HepG2E 3237062 3237427 365 0
USF2 HepG2E 3237095 3237427 332 0
hScc1 BcellGSE12603 3175461 3175942 481 0
hScc1 BcellGSE12603 3185709 3186130 421 0
hScc1 BcellGSE12603 3201947 3202189 242 0
hScc1 BcellGSE12603 3236612 3237249 637 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
12490 mRNA BRUNOL5 chr19 3175700 3248071 246 EST chr19 3247762 3253955Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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