Annotation Detail for TNFRSF17
Basic Information Top
| Gene Symbol: | TNFRSF17 ( BCM,BCMA,CD269 ) |
|---|---|
| Gene Full Name: | tumor necrosis factor receptor superfamily, member 17 |
| Band: | 16p13.13 |
| Quick Links | Entrez ID:608; OMIM: 109545; Uniprot ID:TNR17_HUMAN; ENSEMBL ID: ENSG00000048462; HGNC ID: 11913 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 21 | S-palmitoyl | HMM predict |
| 30 | Phosphoserine(IKK) | HMM predict |
| 32 | Phosphothreonine | HMM predict |
| 32 | Phosphothreonine(CDK) | HMM predict |
| 42 | N-linked | HMM predict |
| 47 | N-linked | HMM predict |
| 48 | Phosphoserine(IKK) | HMM predict |
| 81 | Phosphoserine(PKA) | HMM predict |
| 81 | Phosphoserine(PKG) | HMM predict |
| 82 | Phosphoserine(PKG) | HMM predict |
| 109 | Phosphothreonine(PKC) | HMM predict |
| 121 | Phosphotyrosine(INSR) | HMM predict |
| 158 | O-linked | HMM predict |
- RefSeq ID: NM_001192
- Location:chr16 11966464-11969424
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T30-glioblastoma | GSE21026 | 11956929 | 11957783 | 854 | 9109 |
| CTCF | CD4 | GSE12889 | 11950957 | 11951264 | 307 | 15354 |
| CTCF | CD4 | SISSRdata | 11950957 | 11951264 | 307 | 15354 |
| Fos | K562 | GSE19551 | 11957114 | 11957590 | 476 | 9113 |
| Oct1 | Hela | GSE14283 | 11946672 | 11946750 | 78 | 19754 |
| P300 | T0-glioblastoma | GSE21026 | 11956752 | 11957791 | 1039 | 9193 |
| P300 | T30-glioblastoma | GSE21026 | 11956912 | 11957888 | 976 | 9065 |
| Rb | Senescent | GSE19898 | 11957180 | 11957685 | 505 | 9032 |
| hScc1 | Bcell | GSE12603 | 11950805 | 11951352 | 547 | 15386 |
| hScc1 | CdLS | GSE12603 | 11950984 | 11951352 | 368 | 15297 |
| p130 | Quiescent | GSE19898 | 11957173 | 11957318 | 145 | 9219 |
| p130 | Quiescent | GSE19898 | 11957371 | 11957578 | 207 | 8990 |
| p130 | Senescent | GSE19898 | 11957028 | 11957665 | 637 | 9118 |
| p130 | shRbSenescent | GSE19898 | 11957246 | 11957741 | 495 | 8971 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | Hela | GSE14283 | 11968079 | 11968106 | 27 | 0 |
| hScc1 | CdLS | GSE12603 | 11966236 | 11966715 | 479 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9634 | mRNA | TNFRSF17 | chr16 | 11966464 | 11969426 | 2962 | EST | chr16 | 11935228 | 11977992 | Non-exonic Bidirectional (NOB) pairs | |