Annotation Detail for RORA

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	RORA ( DKFZp686M2414,MGC119326,MGC119329,NR1F1,ROR1,ROR2,ROR3,RZR-ALPHA,RZRA )
Gene Full Name:	RAR-related orphan receptor A
Band:	15q22.2
Quick Links	Entrez ID:6095; OMIM: 600825; Uniprot ID:RORA_HUMAN; ENSEMBL ID: ENSG00000069667; HGNC ID: 10258
Relate to Another Database:	SFARIGene; denovo-db

General

Expression

Regulation

Pathways, Diseases and Drugs

PTM

TF binding site

miRNA targets

Cis-NATs

Post Translation Modification

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PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:24 results

No data

Location(AA)	Modification	Resource
34	O-linked	HMM predict
36	Phosphothreonine(MAPK)	HMM predict
38	Phosphothreonine(CDC2)	HMM predict
38	Phosphothreonine(MAPK)	HMM predict
73	S-palmitoyl	HMM predict
74	S-palmitoyl	HMM predict
85	Phosphoserine(ATM)	HMM predict
96	Phosphotyrosine(INSR)	HMM predict
137	N-linked	HMM predict
140	Phosphotyrosine(SRC)	HMM predict
140	Phosphotyrosine(INSR)	HMM predict
216	Phosphothreonine(MAPK)	HMM predict
236	Phosphotyrosine(INSR)	HMM predict
241	Phosphothreonine(CDC2)	HMM predict
249	Phosphoserine(IKK)	HMM predict
261	Phosphoserine(CDK)	HMM predict
298	Phosphoserine(CDK)	HMM predict
298	O-linked	HMM predict
312	N-linked	HMM predict
407	Phosphoserine(IKK)	HMM predict
409	N-linked	HMM predict
410	N-linked	HMM predict
449	Phosphothreonine(CK2)	HMM predict
528	Phosphotyrosine(EGFR)	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_002943
Location:chr15 58576755-58707023
strand:-

Upstream the gene:0 results
Downstream the gene:0 results
Inside the gene:2 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Oct1	H2O2-Hela	GSE14283	58699963	58699992	29	0
hScc1	Bcell	GSE12603	58672282	58672479	197	0

Validated miRNA targets

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miR Walk:63 results
Tarbase V5.0:0 results

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7a	hsa-let-7a-1	9	21365266
hsa-let-7a	hsa-let-7a-2	11	21365266
hsa-let-7a	hsa-let-7a-3	22	21365266
hsa-let-7a	hsa-let-7a-1	9	21365266
hsa-let-7a	hsa-let-7a-2	11	21365266
hsa-let-7a	hsa-let-7a-3	22	21365266
hsa-let-7a	hsa-let-7a-1	9	21365266
hsa-let-7a	hsa-let-7a-2	11	21365266
hsa-let-7a	hsa-let-7a-3	22	21365266
hsa-let-7a*	hsa-let-7a-1	9	21365266
hsa-let-7a*	hsa-let-7a-3	22	21365266
hsa-let-7a*	hsa-let-7a-1	9	21365266
hsa-let-7a*	hsa-let-7a-3	22	21365266
hsa-let-7a*	hsa-let-7a-1	9	21365266
hsa-let-7a*	hsa-let-7a-3	22	21365266
hsa-let-7b	hsa-let-7b	22	21365266
hsa-let-7b	hsa-let-7b	22	21365266
hsa-let-7b	hsa-let-7b	22	21365266
hsa-let-7b*	hsa-let-7b	22	21365266
hsa-let-7b*	hsa-let-7b	22	21365266
hsa-let-7b*	hsa-let-7b	22	21365266
hsa-let-7c	hsa-let-7c	21	21365266
hsa-let-7c	hsa-let-7c	21	21365266
hsa-let-7c	hsa-let-7c	21	21365266
hsa-let-7c*	hsa-let-7c	21	21365266
hsa-let-7c*	hsa-let-7c	21	21365266
hsa-let-7c*	hsa-let-7c	21	21365266
hsa-let-7d	hsa-let-7d	9	21365266
hsa-let-7d	hsa-let-7d	9	21365266
hsa-let-7d	hsa-let-7d	9	21365266
hsa-let-7d*	hsa-let-7d	9	21365266
hsa-let-7d*	hsa-let-7d	9	21365266
hsa-let-7d*	hsa-let-7d	9	21365266
hsa-let-7e	hsa-let-7e	19	21365266
hsa-let-7e	hsa-let-7e	19	21365266
hsa-let-7e	hsa-let-7e	19	21365266
hsa-let-7e*	hsa-let-7e	19	21365266
hsa-let-7e*	hsa-let-7e	19	21365266
hsa-let-7e*	hsa-let-7e	19	21365266
hsa-let-7f	hsa-let-7f-1	9	21365266
hsa-let-7f	hsa-let-7f-2	X	21365266
hsa-let-7f	hsa-let-7f-1	9	21365266
hsa-let-7f	hsa-let-7f-2	X	21365266
hsa-let-7f	hsa-let-7f-1	9	21365266
hsa-let-7f	hsa-let-7f-2	X	21365266
hsa-let-7f-1*	hsa-let-7f-1	9	21365266
hsa-let-7f-1*	hsa-let-7f-1	9	21365266
hsa-let-7f-1*	hsa-let-7f-1	9	21365266
hsa-let-7f-2*	hsa-let-7f-2	X	21365266
hsa-let-7f-2*	hsa-let-7f-2	X	21365266
hsa-let-7f-2*	hsa-let-7f-2	X	21365266
hsa-let-7g	hsa-let-7g	3	21365266
hsa-let-7g	hsa-let-7g	3	21365266
hsa-let-7g	hsa-let-7g	3	21365266
hsa-let-7g*	hsa-let-7g	3	21365266
hsa-let-7g*	hsa-let-7g	3	21365266
hsa-let-7g*	hsa-let-7g	3	21365266
hsa-let-7i	hsa-let-7i	12	21365266
hsa-let-7i	hsa-let-7i	12	21365266
hsa-let-7i	hsa-let-7i	12	21365266
hsa-let-7i*	hsa-let-7i	12	21365266
hsa-let-7i*	hsa-let-7i	12	21365266
hsa-let-7i*	hsa-let-7i	12	21365266

Cis-Nats regulation

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Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

AutismKB 2.0

Annotation Detail for RORA

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics