Annotation Detail for OPN1SW
Basic Information Top
| Gene Symbol: | OPN1SW ( BCP,BOP,CBT ) |
|---|---|
| Gene Full Name: | opsin 1 (cone pigments), short-wave-sensitive |
| Band: | 7q32.1 |
| Quick Links | Entrez ID:611; OMIM: 613522; Uniprot ID:OPSB_HUMAN; ENSEMBL ID: ENSG00000128617; HGNC ID: 1012 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 14 | N-linked (GlcNAc...) (Probable). | |
| 293 | N6-(retinylidene)lysine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 14 | N-linked (GlcNAc...) (Probable). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 5 | Phosphoserine(PKG) | HMM predict |
| 14 | N-linked | HMM predict |
| 240 | Phosphothreonine(PKC) | HMM predict |
| 338 | O-linked | HMM predict |
| 339 | O-linked | HMM predict |
| 341 | O-linked | HMM predict |
| 341 | O-linked | HMM predict |
| 341 | O-linked | HMM predict |
- RefSeq ID: NM_001708
- Location:chr7 128199782-128203086
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 128206135 | 128206570 | 435 | 3266 |
| Fos | K562 | GSE19551 | 128204716 | 128205582 | 866 | 2063 |
| NRSF | Jurkat | GSE13047 | 128206196 | 128206723 | 527 | 3373 |
| NRSF-mono | Jurkat | QuESTdata | 128206195 | 128206645 | 450 | 3334 |
| Pol3 | GM12878 | GSE19551 | 128210697 | 128211073 | 376 | 7799 |
| p130 | Quiescent | GSE19898 | 128209226 | 128209418 | 192 | 6236 |
| No data |
| No data |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24620 | EST | chr7 | 128006600 | 128007262 | 64 | mRNA | OPN1SW | chr7 | 128006497 | 128009802 | Sense/Antisense (SA) pairs | |