AutismKB 2.0

Annotation Detail for RPL3


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Basic Information Top
Gene Symbol:RPL3 ( MGC104284,TARBP-B )
Gene Full Name: ribosomal protein L3
Band: 22q13.1
Quick LinksEntrez ID:6122; OMIM: 604163; Uniprot ID:RL3_HUMAN; ENSEMBL ID: ENSG00000100316; HGNC ID: 10332
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
7Phosphoserine.
13Phosphoserine.
294N6-acetyllysine.
307Phosphotyrosine.
366N6-acetyllysine.
373N6-acetyllysine.
Location(AA) Modifications Resource
307Phosphotyrosine.Swiss-Prot 53.0
Location(AA) Modification Resource
38Phosphoserine(CK1)HMM predict
302N-linkedHMM predict
307SulfotyrosineHMM predict
310Phosphoserine(ATM)HMM predict
346Phosphothreonine(PKC)HMM predict
350Phosphoserine(PKG)HMM predict
381Phosphothreonine(PKC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_000967
  • Location:chr22 38038833-38045615
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 38045077 38046509 1432 178
H3ac HepG2E 38045703 38046105 402 289
PHF8 HeLaGSE20725 38044943 38046584 1641 148
p130 QuiescentGSE19898 38045371 38046307 936 224
p130 SenescentGSE19898 38045105 38046358 1253 116
p130 SenescentGSE19898 38058792 38059017 225 13289
p130 shRbQuiescentGSE19898 38045863 38046321 458 477
p130 shRbSenescentGSE19898 38045326 38045958 632 27
p130 shRbSenescentGSE19898 38045960 38046275 315 502
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 38036939 38037135 196 1797
CTCF CD4SISSRdata 38036939 38037135 196 1797
CTCF G2GSE9613 38020788 38021275 487 17802
CTCF G2GSE9613 38033181 38033366 185 5560
CTCF G2GSE9613 38035064 38035930 866 3337
CTCF G2GSE9613 38036368 38037229 861 2035
ER MCF7GSE19013 38025418 38026741 1323 12754
FOXA1 MCF7GSE15244 38018737 38019015 278 19958
FOXA1 MCF7GSE15244 38020072 38020352 280 18622
Fos K562GSE19551 38034729 38035120 391 3909
FoxA1 MCF7MACSdata 38018804 38018971 167 19946
FoxA1 MCF7MACSdata 38038454 38038628 174 293
P300 T30-glioblastomaGSE21026 38034307 38038720 4413 2320
RARG MCF7GSE15244 38020072 38020478 406 18559
TFAP2C MCF7GSE21234 38019333 38020145 812 19095
TFAP2C MCF7GSE21234 38020908 38021333 425 17713
TFAP2C MCF7GSE21234 38025750 38026978 1228 12470
USF1 HepG2E 38027558 38027984 426 11063
USF1 HepG2E 38029226 38029473 247 9484
hScc1 BcellGSE12603 38020645 38020857 212 18083
hScc1 BcellGSE12603 38022318 38022491 173 16429
hScc1 BcellGSE12603 38023397 38023785 388 15243
hScc1 BcellGSE12603 38032605 38033366 761 5848
hScc1 BcellGSE12603 38035546 38035930 384 3096
hScc1 BcellGSE12603 38036473 38037229 756 1983
hScc1 CdLSGSE12603 38035064 38035651 587 3476
hScc1 CdLSGSE12603 38036692 38037229 537 1873
hScc1 G2GSE9613 38036436 38037229 793 2001
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 38042374 38042676 302 0
CTCF CD4SISSRdata 38042374 38042676 302 0
CTCF JurkatGSE12889 38042393 38042655 262 0
CTCF G2GSE9613 38042220 38043118 898 0
CTCF G2GSE9613 38045372 38045703 331 0
H3K4me3 colorectalcancer 38043919 38045620 1701 0
H3ac HepG2E 38042220 38045451 3231 0
NFkBII GM12878GSE19485 38044685 38046544 1859 0
NRSF mAbJurkat 38044627 38046140 1513 0
PHF8 Hs68minusFBSGSE20725 38044676 38046387 1711 0
PHF8 Hs68plusFBSGSE20725 38044511 38046434 1923 0
Pol2 GM12878GSE19551 38044711 38046404 1693 0
PolII HeLaGSE12783 38034376 38046902 12526 0
TAF HelaGSE8489 38043847 38045959 2112 0
TAF k562GSE8489 38043453 38046250 2797 0
hScc1 BcellGSE12603 38042220 38042547 327 0
hScc1 BcellGSE12603 38044931 38045703 772 0
hScc1 CdLSGSE12603 38042220 38042591 371 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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