AutismKB 2.0

Annotation Detail for RPL39


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Basic Information Top
Gene Symbol:RPL39 ( - )
Gene Full Name: ribosomal protein L39
Band: Xq24
Quick LinksEntrez ID:6170; OMIM: 601904; Uniprot ID:RL39_HUMAN; ENSEMBL ID: ENSG00000198918; HGNC ID: 10350
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001000
  • Location:chrX 118804496-118809633
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 118809208 118810244 1036 93
Fos K562GSE19551 118827035 118827539 504 17654
Gata2 K562GSE18868 118826997 118827672 675 17701
Myc K562GSE19551 118827009 118827498 489 17620
PHF8 HeLaGSE20725 118809059 118810413 1354 103
Pol2 GM12878GSE19551 118809096 118810399 1303 114
RARG MCF7GSE15244 118809700 118810340 640 387
Rb QuiescentGSE19898 118809500 118809833 333 33
USF1 HepG2E 118818018 118818514 496 8633
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 118786231 118786935 704 17914
CTCF CD4GSE12889 118797816 118797995 179 6591
CTCF CD4GSE12889 118802891 118803129 238 1487
CTCF CD4SISSRdata 118797816 118797995 179 6591
CTCF CD4SISSRdata 118802891 118803129 238 1487
CTCF G2GSE9613 118802916 118803254 338 1412
Fos K562GSE19551 118787478 118787767 289 16874
Oct1 H2O2-HelaGSE14283 118787932 118787967 35 16547
P300 T30-glioblastomaGSE21026 118786352 118787167 815 17737
hScc1 BcellGSE12603 118802916 118803181 265 1448
hScc1 CdLSGSE12603 118797908 118798157 249 6464
hScc1 CdLSGSE12603 118802916 118803326 410 1376
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 118808886 118810108 1222 0
H3ac HepG2E 118805091 118805607 516 0
H3ac HepG2E 118807581 118808050 469 0
H3ac HepG2E 118808640 118810340 1700 0
NRSF mAbJurkat 118808640 118809207 567 0
Nanog hESGSE18292 118808292 118808636 344 0
PHF8 Hs68plusFBSGSE20725 118808926 118810294 1368 0
PolII HeLaGSE12783 118807983 118810798 2815 0
TAF HelaGSE8489 118808640 118809427 787 0
TAF k562GSE8489 118807581 118808050 469 0
TAF k562GSE8489 118808640 118810340 1700 0
hScc1 BcellGSE12603 118808850 118809402 552 0
hScc1 CdLSGSE12603 118808886 118809370 484 0
hScc1 G2GSE9613 118808919 118810031 1112 0
p130 SenescentGSE19898 118809238 118809769 531 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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