Annotation Detail for RPS17

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Basic Information Top

Gene Symbol:	RPS17 ( DBA4,MGC72007,RPS17L1,RPS17L2 )
Gene Full Name:	ribosomal protein S17
Band:	15q25.2
Quick Links	Entrez ID:6218; OMIM: 180472; Uniprot ID:RS17_HUMAN; ENSEMBL ID: ENSG00000184779; HGNC ID: 10397
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	80611980	80612117	137	129
CTCF	CD4	SISSRdata	80611980	80612117	137	129
CTCF	G2	GSE9613	80611737	80612331	594	115
CTCF	G2	GSE9613	81006047	81006673	626	98
ER	Fulvestrant-MCF7	GSE14664	80612006	80612082	76	125
H3K4me3	colorectal	cancer	80612223	80612740	517	562
H3K4me3	colorectal	cancer	81006640	81006890	250	503
H3ac	HepG2	E	80612298	80612885	587	672
H3ac	HepG2	E	80614257	80614661	404	2540
H3ac	HepG2	E	81006430	81007082	652	494
Myc	K562	GSE19551	80611961	80612130	169	126
P300	T30-glioblastoma	GSE21026	81005812	81006851	1039	69
TAF	Hela	GSE8489	80612088	80613025	937	637
TAF	Hela	GSE8489	81006430	81007367	937	636
TAF	k562	GSE8489	81006538	81007367	829	690
hScc1	Bcell	GSE12603	80611763	80612196	433	60
hScc1	Bcell	GSE12603	81006080	81006538	458	47
hScc1	CdLS	GSE12603	81006141	81007007	866	312

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	80588476	80588665	189	19645
CTCF	G2	GSE9613	80591010	80591256	246	17083
CTCF	G2	GSE9613	80593350	80593498	148	14792
CTCF	G2	GSE9613	80595056	80596238	1182	12569
CTCF	G2	GSE9613	80597243	80597829	586	10680
CTCF	G2	GSE9613	80601506	80603964	2458	5481
CTCF	G2	GSE9613	80991586	80992172	586	10680
CTCF	G2	GSE9613	80996281	80997420	1139	5708
CTCF	G2	GSE9613	80997868	80998240	372	4505
CTCF	G2	GSE9613	81001875	81002090	215	576
FOXA1	MCF7	GSE15244	80594735	80596012	1277	12842
FOXA1	eGFP	GSE10845	80594772	80596012	1240	12824
H3ac	HepG2	E	80595096	80595976	880	12680
H3ac	HepG2	E	81002019	81002958	939	70
Oct1	Hela	GSE14283	80997624	80997658	34	4918
Oct4	ES	GSE20650	80597511	80597612	101	10654
USF2	HepG2	E	80595232	80595723	491	12738
hScc1	Bcell	GSE12603	80590676	80591703	1027	17026
hScc1	Bcell	GSE12603	80594996	80596012	1016	12712
hScc1	Bcell	GSE12603	80596492	80596709	217	11615
hScc1	Bcell	GSE12603	80597243	80597802	559	10693
hScc1	Bcell	GSE12603	80601823	80602792	969	5908
hScc1	Bcell	GSE12603	80991586	80992172	586	10680
hScc1	Bcell	GSE12603	80996097	80997420	1323	5800
hScc1	Bcell	GSE12603	80997904	80998690	786	4262
hScc1	CdLS	GSE12603	80597243	80598004	761	10592
hScc1	CdLS	GSE12603	80601892	80602687	795	5926
hScc1	CdLS	GSE12603	80991586	80992209	623	10661
hScc1	CdLS	GSE12603	80996235	80996836	601	6023

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
ETS1	Jurkat	GSE17954	80611108	80612524	1416
ETS1	Jurkat	GSE17954	81005454	81006966	1512
H3K4me3	colorectal	cancer	80610549	80610843	294
H3K4me3	colorectal	cancer	80611198	80611533	335
H3K4me3	colorectal	cancer	81005541	81005876	335
H3ac	HepG2	E	80607711	80610843	3132
H3ac	HepG2	E	80611198	80611533	335
H3ac	HepG2	E	81003336	81005186	1850
H3ac	HepG2	E	81005541	81005977	436
TAF	Hela	GSE8489	80607532	80610843	3311
TAF	Hela	GSE8489	80611198	80611634	436
TAF	Hela	GSE8489	81001946	81005186	3240
TAF	Hela	GSE8489	81005541	81006047	506
TAF	k562	GSE8489	80611198	80611737	539
TAF	k562	GSE8489	81005541	81006015	474

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018