AutismKB 2.0

Annotation Detail for RPS19


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Basic Information Top
Gene Symbol:RPS19 ( DBA,DBA1 )
Gene Full Name: ribosomal protein S19
Band: 19q13.2
Quick LinksEntrez ID:6223; OMIM: 603474; Uniprot ID:RS19_HUMAN; ENSEMBL ID: ENSG00000105372; HGNC ID: 10402
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
23N6-acetyllysine.
77N6-acetyllysine.
111N6-acetyllysine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
59Phosphoserine(PKB)HMM predict
60Phosphothreonine(PKC)HMM predict
124Phosphothreonine(PKA)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001022
  • Location:chr19 47055827-47067321
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 47055377 47055814 437 232
CTCF CD4SISSRdata 47055377 47055814 437 232
CTCF G2GSE9613 47055422 47055931 509 151
Rb SenescentGSE19898 47055375 47056245 870 18
hScc1 CdLSGSE12603 47055422 47055825 403 204
p130 QuiescentGSE19898 47055377 47056206 829 36
p130 SenescentGSE19898 47055276 47056315 1039 32
p130 shRbQuiescentGSE19898 47055237 47056247 1010 86
p130 shRbSenescentGSE19898 47055300 47056340 1040 8
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 47069143 47069434 291 1967
CTCF CD4SISSRdata 47069143 47069434 291 1967
CTCF HelaGSE12889 47069124 47069363 239 1922
CTCF G2GSE9613 47069135 47069380 245 1936
Oct1 H2O2-HelaGSE14283 47070104 47070139 35 2800
Oct1 HelaGSE14283 47070104 47070135 31 2798
STAT1 HeLaGSE12783 47067391 47069664 2273 1206
hScc1 BcellGSE12603 47069135 47069380 245 1936
hScc1 CdLSGSE12603 47069135 47069380 245 1936
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 47055276 47056544 1268 0
H3K4me3 colorectalcancer 47057108 47057904 796 0
H3ac HepG2E 47056438 47058824 2386 0
Myc hESGSE17917 47056155 47056469 314 0
Oct1 H2O2-HelaGSE14283 47063173 47063202 29 0
PHF8 Hs68minusFBSGSE20725 47055537 47057252 1715 0
Rb GrowingGSE19898 47055857 47056007 150 0
Rb shRbSenescenceGSE19898 47055779 47056031 252 0
TFAP2C MCF7GSE21234 47062091 47062541 450 0
VDR GM10855-stimGSE22484 47061970 47070014 8044 0
VDR GM10861-UnstimGSE22484 47063156 47069935 6779 0
VDR GM10861-stimGSE22484 47062002 47070050 8048 0
hScc1 BcellGSE12603 47055422 47056852 1430 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-155 hsa-mir-155 21 20548288
hsa-miR-155* hsa-mir-155 21 20548288
hsa-miR-15a hsa-mir-15a 13 19714650
hsa-miR-15a hsa-mir-15a 13 17351108
hsa-miR-15a* hsa-mir-15a 13 19714650
hsa-miR-15a* hsa-mir-15a 13 17351108
hsa-miR-16 hsa-mir-16-1 13 17351108
hsa-miR-16 hsa-mir-16-2 3 17351108
hsa-miR-16-1* hsa-mir-16-1 13 17351108
hsa-miR-200b hsa-mir-200b 1 20548288
hsa-miR-200b* hsa-mir-200b 1 20548288
hsa-miR-29c hsa-mir-29c 1 20548288
hsa-miR-29c* hsa-mir-29c 1 20548288
hsa-miR-34a hsa-mir-34a 1 20548288
hsa-miR-34a* hsa-mir-34a 1 20548288
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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