Annotation Detail for RTN2
Basic Information Top
| Gene Symbol: | RTN2 ( NSP2,NSPL1 ) |
|---|---|
| Gene Full Name: | reticulon 2 |
| Band: | 19q13.32 |
| Quick Links | Entrez ID:6253; OMIM: 603183; Uniprot ID:RTN2_HUMAN; ENSEMBL ID: ENSG00000125744; HGNC ID: 10468 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 44 | Phosphoserine (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 44 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 16 | O-linked | HMM predict |
| 19 | O-linked | HMM predict |
| 20 | O-linked | HMM predict |
| 21 | O-linked | HMM predict |
| 21 | Phosphothreonine(CDK) | HMM predict |
| 21 | Phosphothreonine(MAPK) | HMM predict |
| 44 | Phosphoserine(CK1) | HMM predict |
| 53 | Phosphoserine(ATM) | HMM predict |
| 53 | Phosphoserine(CK1) | HMM predict |
| 92 | Phosphoserine(IKK) | HMM predict |
| 114 | Phosphoserine(CK1) | HMM predict |
| 116 | Phosphoserine(ATM) | HMM predict |
| 118 | Phosphoserine(CDC2) | HMM predict |
| 118 | Phosphoserine(ATM) | HMM predict |
| 160 | Phosphoserine(IKK) | HMM predict |
| 160 | O-linked | HMM predict |
| 161 | O-linked | HMM predict |
| 163 | Phosphoserine(CK1) | HMM predict |
| 163 | O-linked | HMM predict |
| 166 | Phosphothreonine(CDK) | HMM predict |
| 199 | Phosphoserine(CDK) | HMM predict |
| 199 | Phosphoserine(MAPK) | HMM predict |
| 199 | Phosphoserine(CDC2) | HMM predict |
| 204 | Phosphothreonine(CDK) | HMM predict |
| 208 | O-linked | HMM predict |
| 211 | O-linked | HMM predict |
| 218 | O-linked | HMM predict |
| 218 | O-linked | HMM predict |
| 218 | Phosphothreonine(MAPK) | HMM predict |
| 220 | Phosphoserine(CDK) | HMM predict |
| 220 | Phosphoserine(CDC2) | HMM predict |
| 227 | Phosphoserine(IKK) | HMM predict |
| 229 | Phosphoserine(CK2) | HMM predict |
| 314 | Phosphothreonine(CDK) | HMM predict |
| 326 | Phosphoserine(CDC2) | HMM predict |
| 330 | O-linked | HMM predict |
| 416 | Phosphotyrosine(Syk) | HMM predict |
| 441 | Phosphoserine(PKG) | HMM predict |
| 441 | Phosphoserine(CAMK2) | HMM predict |
| 532 | O-linked | HMM predict |
- RefSeq ID: NM_005619
- Location:chr19 50680390-50692150
- strand:-
| No data |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 50688596 | 50688873 | 277 | 0 |
| CTCF | CD4 | SISSRdata | 50688596 | 50688873 | 277 | 0 |
| NRSF | Jurkat | GSE13047 | 50690712 | 50692128 | 1416 | 0 |
| NRSF | mAb | Jurkat | 50688804 | 50691599 | 2795 | 0 |
| NRSF-mono | Jurkat | QuESTdata | 50690999 | 50692050 | 1051 | 0 |
| NRSF-poly | Jurkat | QuESTdata | 50690832 | 50692311 | 1479 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 50691071 | 50691098 | 27 | 0 |
| PolII | HeLa | GSE12783 | 50691155 | 50692908 | 1753 | 0 |
| hScc1 | Bcell | GSE12603 | 50691461 | 50691975 | 514 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13351 | EST | chr19 | 50683874 | 50697388 | 132 | mRNA | RTN2 | chr19 | 50680389 | 50692151 | Sense/Antisense (SA) pairs | |