AutismKB 2.0

Annotation Detail for RYR3


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Basic Information Top
Gene Symbol:RYR3 ( - )
Gene Full Name: ryanodine receptor 3
Band: 15q13.3-q14
Quick LinksEntrez ID:6263; OMIM: 180903; Uniprot ID:RYR3_HUMAN; ENSEMBL ID: ENSG00000198838; HGNC ID: 10485
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
3276N-linked (GlcNAc...) (Potential).
3760N-linked (GlcNAc...) (Potential).
3801N-linked (GlcNAc...) (Potential).
4000N-linked (GlcNAc...) (Potential).
4007N-linked (GlcNAc...) (Potential).
4697N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
3276N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
3760N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
3801N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
4000N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
4007N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
4697N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
58Phosphotyrosine(INSR)HMM predict
114Phosphoserine(IKK)HMM predict
125O-linkedHMM predict
128Phosphoserine(PKA)HMM predict
128Phosphoserine(ATM)HMM predict
209Phosphoserine(ATM)HMM predict
211Phosphoserine(CK2)HMM predict
242N-linkedHMM predict
258Phosphothreonine(PKC)HMM predict
311Phosphoserine(PKB)HMM predict
405Phosphoserine(ATM)HMM predict
413N-linkedHMM predict
419Phosphoserine(ATM)HMM predict
426N-linkedHMM predict
554Phosphoserine(CK1)HMM predict
602S-palmitoylHMM predict
605S-palmitoylHMM predict
690Phosphotyrosine(Syk)HMM predict
806Phosphotyrosine(Syk)HMM predict
963Phosphotyrosine(Syk)HMM predict
1281Phosphoserine(IKK)HMM predict
1299Phosphoserine(CDK)HMM predict
1303Phosphoserine(IKK)HMM predict
1364N-linkedHMM predict
1399Phosphoserine(ATM)HMM predict
1402Phosphoserine(IKK)HMM predict
1403N-linkedHMM predict
1406N-linkedHMM predict
1833Phosphotyrosine(EGFR)HMM predict
1859Phosphothreonine(PKC)HMM predict
1863Phosphothreonine(PKC)HMM predict
1922Phosphoserine(IKK)HMM predict
1946Phosphothreonine(CK2)HMM predict
2005O-linkedHMM predict
2009O-linkedHMM predict
2101S-palmitoylHMM predict
2104Phosphoserine(PKG)HMM predict
2117Phosphotyrosine(Jak)HMM predict
2153Phosphoserine(CK1)HMM predict
2195Phosphotyrosine(EGFR)HMM predict
2209Phosphoserine(CK1)HMM predict
2260Phosphoserine(ATM)HMM predict
2268Phosphoserine(CK2)HMM predict
2269Phosphothreonine(CK2)HMM predict
2401O-linkedHMM predict
2403Phosphoserine(IKK)HMM predict
2406O-linkedHMM predict
2440Phosphoserine(CK1)HMM predict
2459Phosphothreonine(PKC)HMM predict
2591Phosphoserine(CK2)HMM predict
2675Phosphoserine(PKG)HMM predict
2706Phosphoserine(CK1)HMM predict
2708Phosphoserine(CAMK2)HMM predict
2708Phosphoserine(IKK)HMM predict
2708Phosphoserine(PKG)HMM predict
2881Phosphoserine(CDC2)HMM predict
2891Phosphotyrosine(INSR)HMM predict
2916Phosphoserine(CAMK2)HMM predict
2991N-linkedHMM predict
3089Phosphoserine(IKK)HMM predict
3156O-linkedHMM predict
3165Phosphothreonine(PKA)HMM predict
3353Phosphothreonine(PKC)HMM predict
3402Phosphothreonine(CK2)HMM predict
3447Phosphothreonine(PKC)HMM predict
3522Phosphotyrosine(SRC)HMM predict
3522SulfotyrosineHMM predict
3523Phosphoserine(CK2)HMM predict
3535Phosphoserine(CDC2)HMM predict
3566Phosphothreonine(PKC)HMM predict
3577Phosphotyrosine(INSR)HMM predict
3760N-linkedHMM predict
3765N-linkedHMM predict
3855Phosphoserine(ATM)HMM predict
3888N-linkedHMM predict
4007N-linkedHMM predict
4103Phosphoserine(CK2)HMM predict
4105Phosphoserine(ATM)HMM predict
4105Phosphoserine(CK2)HMM predict
4120Phosphoserine(CK1)HMM predict
4122Phosphotyrosine(INSR)HMM predict
4152N-linkedHMM predict
4161Phosphothreonine(PKA)HMM predict
4176Phosphothreonine(PKC)HMM predict
4472Phosphotyrosine(Abl)HMM predict
4472Phosphotyrosine(Syk)HMM predict
4472Phosphotyrosine(INSR)HMM predict
4472Phosphotyrosine(SRC)HMM predict
4527Phosphoserine(CK2)HMM predict
4599Phosphoserine(IKK)HMM predict
4697N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001036
  • Location:chr15 31390468-31945593
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 31372304 31372459 155 18087
CTCF CD4SISSRdata 31372304 31372459 155 18087
CTCF JurkatGSE12889 31372312 31372556 244 18035
CTCF G2GSE9613 31372338 31372517 179 18041
CTCF G2GSE9613 31390245 31390614 369 39
Oct1 H2O2-HelaGSE14283 31389126 31389158 32 1327
Oct1 HelaGSE14283 31389126 31389163 37 1324
hScc1 BcellGSE12603 31372160 31372822 662 17978
hScc1 BcellGSE12603 31389063 31389486 423 1194
hScc1 CdLSGSE12603 31372160 31372822 662 17978
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 31780137 31780582 445 0
CTCF CD4SISSRdata 31780137 31780582 445 0
CTCF JurkatGSE12889 31749276 31749365 89 0
CTCF G2GSE9613 31520422 31520569 147 0
CTCF G2GSE9613 31780164 31781218 1054 0
CTCF G2GSE9613 31817181 31817844 663 0
Fos K562GSE19551 31456755 31457221 466 0
Myc K562GSE19551 31521968 31522210 242 0
NRSF JurkatGSE13047 31627140 31628132 992 0
NRSF JurkatSISSRdata 31627374 31627771 397 0
NRSF mAbJurkat 31623627 31626599 2972 0
NRSF mAbJurkat 31627083 31631430 4347 0
NRSF mAbJurkat 31631866 31632521 655 0
NRSF-mono JurkatQuESTdata 31555023 31555232 209 0
NRSF-mono JurkatQuESTdata 31627205 31628125 920 0
NRSF-poly JurkatQuESTdata 31554976 31555403 427 0
NRSF-poly JurkatQuESTdata 31627257 31628036 779 0
Nanog ESGSE20650 31548206 31548819 613 0
Nanog ESGSE20650 31639030 31639426 396 0
Nanog ESGSE20650 31692341 31692698 357 0
Nanog ESGSE20650 31914349 31915115 766 0
Nanog hESGSE18292 31548324 31548813 489 0
Nanog hESGSE18292 31923699 31924042 343 0
Nanog hESGSE18292 31939811 31940241 430 0
Oct1 H2O2-HelaGSE14283 31398831 31398860 29 0
Oct1 H2O2-HelaGSE14283 31417351 31417382 31 0
Oct1 H2O2-HelaGSE14283 31448132 31448167 35 0
Oct1 H2O2-HelaGSE14283 31461478 31461506 28 0
Oct1 H2O2-HelaGSE14283 31875340 31875368 28 0
Oct1 HelaGSE14283 31398828 31398867 39 0
Oct1 HelaGSE14283 31420799 31420841 42 0
Oct1 HelaGSE14283 31422920 31422976 56 0
Oct1 HelaGSE14283 31498115 31498144 29 0
Oct1 HelaGSE14283 31508202 31508231 29 0
Oct1 HelaGSE14283 31539050 31539116 66 0
Oct1 HelaGSE14283 31540239 31540277 38 0
Oct1 HelaGSE14283 31570522 31570556 34 0
Oct1 HelaGSE14283 31574411 31574440 29 0
Oct1 HelaGSE14283 31657436 31657474 38 0
Oct1 HelaGSE14283 31757012 31757044 32 0
Oct1 HelaGSE14283 31757546 31757587 41 0
Oct1 HelaGSE14283 31802709 31802757 48 0
Oct1 HelaGSE14283 31804288 31804323 35 0
Oct1 HelaGSE14283 31845437 31845467 30 0
Oct1 HelaGSE14283 31901342 31901380 38 0
Oct1 HelaGSE14283 31907575 31907602 27 0
Oct1 HelaGSE14283 31937209 31937239 30 0
Oct4 ESGSE20650 31639004 31639345 341 0
Oct4 hESGSE17917 31749254 31749403 149 0
Oct4 hESGSE17917 31914466 31914975 509 0
P300 T0-glioblastomaGSE21026 31881488 31882098 610 0
RNAII Tamoxifen-MCF7GSE14664 31475385 31475425 40 0
USF1 HepG2E 31738265 31738470 205 0
hScc1 BcellGSE12603 31780130 31780811 681 0
hScc1 BcellGSE12603 31817152 31817772 620 0
hScc1 CdLSGSE12603 31779942 31780924 982 0
hScc1 CdLSGSE12603 31814974 31815682 708 0
p130 SenescentGSE19898 31801980 31802201 221 0
p63 keratinocytesGSE17611 31530372 31531391 1019 0
p63 keratinocytesGSE17611 31795487 31796361 874 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
8610 mRNA RYR3 chr15 31390468 31945594 72 EST chr15 31931277 31934407Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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