Annotation Detail for S100A1

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Basic Information Top

Gene Symbol:	S100A1 ( S100,S100-alpha,S100A )
Gene Full Name:	S100 calcium binding protein A1
Band:	1q21.3
Quick Links	Entrez ID:6271; OMIM: 176940; Uniprot ID:S10A1_HUMAN; ENSEMBL ID: ENSG00000160678; HGNC ID: 10486
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:1 results

No data

Location(AA)	Modification	Resource
30	Phosphoserine(PKG)	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_006271
Location:chr1 151867496-151871136
strand:+

Upstream the gene:0 results
Downstream the gene:0 results
Inside the gene:4 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
H3ac	HepG2	E	151868221	151869277	1056	0
H3ac	HepG2	E	151869994	151870283	289	0
hScc1	Bcell	GSE12603	151867172	151868117	945	0
p130	Senescent	GSE19898	151870639	151870825	186	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
1633	mRNA	S100A1	chr1	150413945	150417586	148	mRNA	S100A13	chr1	150404356	150416909	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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