AutismKB 2.0

Annotation Detail for SAFB


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Basic Information Top
Gene Symbol:SAFB ( DKFZp779C1727,HAP,HET,SAF-B1,SAFB1 )
Gene Full Name: scaffold attachment factor B
Band: 19p13.3
Quick LinksEntrez ID:6294; OMIM: 602895; Uniprot ID:SAFB1_HUMAN; ENSEMBL ID: ENSG00000160633; HGNC ID: 10520
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
55Phosphoserine.
194Phosphothreonine.
235Phosphoserine.
247Phosphoserine.
288Phosphoserine.
344Phosphoserine (By similarity).
373Phosphoserine.
383Phosphoserine.
384Phosphoserine.
475N6-acetyllysine.
555Phosphoserine.
557Phosphoserine.
589Phosphoserine.
601Phosphoserine.
604Phosphoserine.
607N6-acetyllysine.
616Nuclear localization signal (Potential).
808Phosphoserine.
Location(AA) Modifications Resource
20PhosphoserinePhospho.ELM 6.0
21PhosphoserinePhospho.ELM 6.0
23PhosphoserinePhospho.ELM 6.0
32PhosphoserinePhospho.ELM 6.0
194PhosphothreoninePhospho.ELM 6.0
234PhosphoserinePhospho.ELM 6.0
288Phosphoserine.Swiss-Prot 53.0
288PhosphoserinePhospho.ELM 6.0
344PhosphoserinePhospho.ELM 6.0
344Phosphoserine (By similarity).Swiss-Prot 53.0
384PhosphoserinePhospho.ELM 6.0
384Phosphoserine.Swiss-Prot 53.0
416PhosphothreoninePhospho.ELM 6.0
555PhosphoserinePhospho.ELM 6.0
589PhosphoserinePhospho.ELM 6.0
589Phosphoserine.Swiss-Prot 53.0
601PhosphoserinePhospho.ELM 6.0
601Phosphoserine.Swiss-Prot 53.0
604PhosphoserinePhospho.ELM 6.0
604Phosphoserine.Swiss-Prot 53.0
621PhosphoserinePhospho.ELM 6.0
808Phosphoserine.Swiss-Prot 53.0
808PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
20O-linkedHMM predict
21O-linkedHMM predict
21O-linkedHMM predict
23Phosphoserine(CK1)HMM predict
24Phosphoserine(CK1)HMM predict
24Phosphoserine(IKK)HMM predict
32PhosphoserineHMM predict
32Phosphoserine(PKG)HMM predict
85Phosphothreonine(PKC)HMM predict
109Phosphoserine(CK1)HMM predict
119Phosphoserine(CK1)HMM predict
141N-linkedHMM predict
161Phosphoserine(CK1)HMM predict
234Phosphoserine(CK2)HMM predict
235Phosphoserine(CK2)HMM predict
235Phosphoserine(CK1)HMM predict
246Phosphoserine(IKK)HMM predict
247Phosphoserine(ATM)HMM predict
307PhosphothreonineHMM predict
321Phosphoserine(IKK)HMM predict
325Phosphoserine(CK2)HMM predict
332Phosphoserine(CK1)HMM predict
340O-linkedHMM predict
350Phosphoserine(CK1)HMM predict
373Phosphoserine(CK1)HMM predict
374Phosphothreonine(CK2)HMM predict
375O-linkedHMM predict
375Phosphoserine(CK1)HMM predict
375Phosphoserine(CK2)HMM predict
384Phosphoserine(ATM)HMM predict
384PhosphoserineHMM predict
395Phosphoserine(PKA)HMM predict
395Phosphoserine(PKG)HMM predict
416O-linkedHMM predict
491Phosphothreonine(PKC)HMM predict
504Phosphoserine(CK2)HMM predict
553Phosphothreonine(PKA)HMM predict
560Phosphothreonine(PKC)HMM predict
580Phosphoserine(PKG)HMM predict
593MethyllysineHMM predict
617Phosphoserine(CK1)HMM predict
627Phosphoserine(CK1)HMM predict
723Phosphotyrosine(Jak)HMM predict
811MethylarginineHMM predict
832Phosphoserine(IKK)HMM predict
857Phosphoserine(CK1)HMM predict
857Phosphoserine(PKB)HMM predict
868MethylarginineHMM predict
874MethylarginineHMM predict
902MethylarginineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002967
  • Location:chr19 5574163-5619487
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Rb shRbSenescenceGSE19898 5574019 5574215 196 47
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 5624253 5624288 35 4783
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 5608837 5608932 95 0
ER E2-MCF7GSE14664 5609495 5609529 34 0
H3ac HepG2E 5574708 5577659 2951 0
Myc K562GSE19551 5617203 5617512 309 0
Oct1 HelaGSE14283 5609119 5609148 29 0
Rb GrowingGSE19898 5617353 5617543 190 0
TAF k562GSE8489 5574862 5575520 658 0
TAF k562GSE8489 5576117 5577513 1396 0
TAF k562GSE8489 5619411 5619554 143 0
p130 QuiescentGSE19898 5574649 5574789 140 0
p130 shRbQuiescentGSE19898 5573708 5574830 1122 0
p130 shRbSenescentGSE19898 5617267 5617593 326 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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