AutismKB 2.0

Annotation Detail for SLC22A23


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Basic Information Top
Gene Symbol:SLC22A23 ( C6orf85,DKFZp434F011,FLJ22174 )
Gene Full Name: solute carrier family 22, member 23
Band: 6p25.2
Quick LinksEntrez ID:63027; OMIM: 611697; Uniprot ID:S22AN_HUMAN; ENSEMBL ID: ENSG00000137266; HGNC ID: 21106
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
24N-linked (GlcNAc...) (Potential).
279N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_021945
  • Location:chr6 3214690-3390216
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 3402365 3402518 153 12225
CTCF CD4SISSRdata 3402365 3402518 153 12225
CTCF JurkatGSE12889 3402254 3402529 275 12175
CTCF G2GSE9613 3391313 3391946 633 1413
CTCF G2GSE9613 3396807 3397017 210 6696
CTCF G2GSE9613 3398739 3399068 329 8687
CTCF G2GSE9613 3400926 3403079 2153 11786
H3K4me3 colorectalcancer 3399793 3401145 1352 10253
H3K4me3 colorectalcancer 3401795 3402160 365 11761
H3ac HepG2E 3398995 3400962 1967 9762
Oct1 HelaGSE14283 3398537 3398568 31 8336
TFAP2C MCF7GSE21234 3402838 3403506 668 12956
hScc1 BcellGSE12603 3396844 3397017 173 6714
hScc1 BcellGSE12603 3400962 3401362 400 10946
hScc1 BcellGSE12603 3401871 3402523 652 11981
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 3196772 3197008 236 17801
CTCF CD4SISSRdata 3196772 3197008 236 17801
CTCF G2GSE9613 3195708 3196163 455 18755
CTCF G2GSE9613 3196726 3198249 1523 17203
CTCF G2GSE9613 3200431 3200616 185 14167
CTCF G2GSE9613 3203636 3205075 1439 10335
CTCF G2GSE9613 3209543 3209872 329 4983
CTCF G2GSE9613 3210435 3210747 312 4100
ER MCF7GSE19013 3207906 3208759 853 6358
H3ac HepG2E 3196506 3196874 368 18001
H3ac HepG2E 3204628 3205075 447 9839
H3ac HepG2E 3205994 3206281 287 8553
Myc K562GSE19551 3196629 3197141 512 17806
Myc hESGSE17917 3204235 3204574 339 10286
Oct1 H2O2-HelaGSE14283 3212692 3212739 47 1975
Oct1 HelaGSE14283 3212694 3212739 45 1974
Oct4 hESGSE17917 3204114 3204525 411 10371
PHF8 293TGSE20725 3203751 3204959 1208 10336
PHF8 HeLaGSE20725 3204034 3205153 1119 10097
hScc1 BcellGSE12603 3196629 3197144 515 17804
hScc1 BcellGSE12603 3198065 3198382 317 16467
hScc1 BcellGSE12603 3203865 3205040 1175 10238
hScc1 CdLSGSE12603 3196506 3197223 717 17826
hScc1 G2GSE9613 3203592 3205075 1483 10357
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 3224765 3225087 322 0
CTCF CD4GSE12889 3356188 3356523 335 0
CTCF CD4SISSRdata 3224765 3225087 322 0
CTCF CD4SISSRdata 3356188 3356523 335 0
CTCF G2GSE9613 3217788 3218663 875 0
CTCF G2GSE9613 3219463 3219846 383 0
CTCF G2GSE9613 3223470 3224029 559 0
CTCF G2GSE9613 3224771 3225199 428 0
CTCF G2GSE9613 3228678 3229429 751 0
CTCF G2GSE9613 3231972 3232381 409 0
CTCF G2GSE9613 3233825 3234657 832 0
CTCF G2GSE9613 3240543 3241049 506 0
CTCF G2GSE9613 3243416 3243595 179 0
CTCF G2GSE9613 3249243 3249421 178 0
CTCF G2GSE9613 3251836 3252054 218 0
CTCF G2GSE9613 3255532 3255676 144 0
CTCF G2GSE9613 3257824 3258256 432 0
CTCF G2GSE9613 3263953 3264463 510 0
CTCF G2GSE9613 3269080 3269722 642 0
CTCF G2GSE9613 3274981 3275857 876 0
CTCF G2GSE9613 3292157 3292567 410 0
CTCF G2GSE9613 3297156 3297435 279 0
CTCF G2GSE9613 3306545 3307067 522 0
CTCF G2GSE9613 3308593 3309130 537 0
CTCF G2GSE9613 3309708 3310142 434 0
CTCF G2GSE9613 3317404 3317983 579 0
CTCF G2GSE9613 3318719 3319557 838 0
CTCF G2GSE9613 3322749 3323160 411 0
CTCF G2GSE9613 3331748 3332156 408 0
CTCF G2GSE9613 3355680 3356617 937 0
CTCF G2GSE9613 3358471 3358943 472 0
CTCF G2GSE9613 3378070 3378782 712 0
CTCF G2GSE9613 3379903 3380889 986 0
CTCF G2GSE9613 3386162 3386344 182 0
ER MCF7GSE19013 3363944 3364484 540 0
FOXA1 MCF7GSE15244 3325393 3325890 497 0
Fos K562GSE19551 3269491 3270253 762 0
FoxA1 MCF7MACSdata 3325603 3325839 236 0
Gata2 K562GSE18868 3233211 3234583 1372 0
Gata2 K562GSE18868 3337893 3338928 1035 0
H3ac HepG2E 3285578 3285930 352 0
H3ac HepG2E 3297758 3298083 325 0
H3ac HepG2E 3311772 3312719 947 0
H3ac HepG2E 3319074 3319557 483 0
H3ac HepG2E 3321862 3322929 1067 0
H3ac HepG2E 3348864 3349394 530 0
H3ac HepG2E 3354454 3356366 1912 0
KLF4 hESGSE17917 3301140 3301382 242 0
LIN9 G0GSE7516 3387799 3388828 1029 0
LIN9 SGSE7516 3387978 3388718 740 0
Myc K562GSE19551 3269625 3270078 453 0
NRSF mAbJurkat 3347262 3347541 279 0
Oct1 H2O2-HelaGSE14283 3341731 3341763 32 0
P300 T30-glioblastomaGSE21026 3269406 3270240 834 0
RARA MCF7GSE15244 3309428 3310239 811 0
RARA MCF7GSE15244 3327328 3328328 1000 0
RARA MCF7GSE15244 3328723 3329357 634 0
RARA MCF7GSE15244 3355461 3356330 869 0
RARG MCF7GSE15244 3328723 3329282 559 0
Rb GrowingGSE19898 3272721 3272835 114 0
Rb GrowingGSE19898 3373108 3373216 108 0
Rb GrowingGSE19898 3383585 3383770 185 0
Rb SenescentGSE19898 3383480 3383869 389 0
Sox2 hESGSE18292 3301692 3301948 256 0
TFAP2C MCF7GSE21234 3327457 3328067 610 0
TFAP2C MCF7GSE21234 3363550 3364337 787 0
USF1 HepG2E 3325294 3325890 596 0
USF1 HepG2E 3326255 3327189 934 0
USF1 HepG2E 3327582 3327789 207 0
USF2 HepG2E 3306774 3307199 425 0
USF2 HepG2E 3326255 3327047 792 0
USF2 HepG2E 3354743 3356401 1658 0
VDR GM10855-stimGSE22484 3312429 3314645 2216 0
VDR GM10861-stimGSE22484 3311465 3313720 2255 0
hScc1 BcellGSE12603 3221537 3221682 145 0
hScc1 BcellGSE12603 3224771 3225613 842 0
hScc1 BcellGSE12603 3241784 3242097 313 0
hScc1 BcellGSE12603 3262236 3263378 1142 0
hScc1 BcellGSE12603 3263989 3264635 646 0
hScc1 BcellGSE12603 3306701 3306923 222 0
hScc1 BcellGSE12603 3355942 3356512 570 0
hScc1 BcellGSE12603 3362726 3363055 329 0
hScc1 BcellGSE12603 3378422 3378814 392 0
hScc1 BcellGSE12603 3386761 3387051 290 0
hScc1 CdLSGSE12603 3224771 3225683 912 0
hScc1 CdLSGSE12603 3356019 3356617 598 0
hScc1 G2GSE9613 3224771 3225649 878 0
p130 QuiescentGSE19898 3388063 3388363 300 0
p130 SenescentGSE19898 3387956 3388515 559 0
p130 shRbQuiescentGSE19898 3388149 3388666 517 0
p130 shRbSenescentGSE19898 3383448 3383859 411 0
p130 shRbSenescentGSE19898 3388059 3388404 345 0
p63 keratinocytesGSE17611 3377012 3378567 1555 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
22067 mRNA LOC389362 chr6 3174004 3233893 233 mRNA C6orf85 chr6 3214690 3390217Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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