Annotation Detail for SCNN1G
Basic Information Top
| Gene Symbol: | SCNN1G ( BESC3,ENaCg,ENaCgamma,PHA1,SCNEG ) |
|---|---|
| Gene Full Name: | sodium channel, nonvoltage-gated 1, gamma |
| Band: | 16p12.2 |
| Quick Links | Entrez ID:6340; OMIM: 600761; Uniprot ID:SCNNG_HUMAN; ENSEMBL ID: ENSG00000166828; HGNC ID: 10602 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 209 | N-linked (GlcNAc...) (Potential). | |
| 248 | N-linked (GlcNAc...) (Potential). | |
| 271 | N-linked (GlcNAc...) (Potential). | |
| 291 | N-linked (GlcNAc...) (Potential). | |
| 497 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 209 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 248 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 271 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 291 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 497 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 109 | Phosphothreonine(PKC) | HMM predict |
| 209 | N-linked | HMM predict |
| 212 | Phosphoserine(CK2) | HMM predict |
| 234 | Phosphotyrosine(INSR) | HMM predict |
| 271 | N-linked | HMM predict |
| 291 | N-linked | HMM predict |
| 317 | Phosphotyrosine(Syk) | HMM predict |
| 317 | Phosphotyrosine(EGFR) | HMM predict |
| 337 | Sulfotyrosine | HMM predict |
| 370 | Phosphoserine(IKK) | HMM predict |
| 497 | N-linked | HMM predict |
| 587 | Phosphoserine(CDC2) | HMM predict |
| 587 | Phosphoserine(IKK) | HMM predict |
| 622 | Phosphothreonine(CDK) | HMM predict |
| 622 | Phosphothreonine(CDC2) | HMM predict |
| 622 | Phosphothreonine(MAPK) | HMM predict |
- RefSeq ID: NM_001039
- Location:chr16 23101540-23135700
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 23101249 | 23101492 | 243 | 170 |
| CTCF | CD4 | SISSRdata | 23101249 | 23101492 | 243 | 170 |
| CTCF | G2 | GSE9613 | 23101108 | 23101324 | 216 | 325 |
| Myc | K562 | GSE19551 | 23101141 | 23101497 | 356 | 222 |
| Myc | hES | GSE17917 | 23101052 | 23101487 | 435 | 271 |
| NRSF | Jurkat | GSE13047 | 23093151 | 23094278 | 1127 | 7826 |
| NRSF | Jurkat | SISSRdata | 23093470 | 23093775 | 305 | 7918 |
| NRSF | mAb | Jurkat | 23088722 | 23089044 | 322 | 12658 |
| NRSF | mAb | Jurkat | 23089790 | 23090161 | 371 | 11565 |
| NRSF | mAb | Jurkat | 23091340 | 23091775 | 435 | 9983 |
| NRSF | mAb | Jurkat | 23093472 | 23094134 | 662 | 7738 |
| NRSF | mAb | Jurkat | 23094929 | 23095428 | 499 | 6362 |
| NRSF | mAb | Jurkat | 23095738 | 23096129 | 391 | 5607 |
| NRSF | mAb | Jurkat | 23096466 | 23096642 | 176 | 4987 |
| NRSF | mAb | Jurkat | 23097557 | 23097899 | 342 | 3813 |
| NRSF | mAb | Jurkat | 23098251 | 23098882 | 631 | 2974 |
| NRSF-mono | Jurkat | QuESTdata | 23093222 | 23094164 | 942 | 7848 |
| NRSF | pAb | Jurkat | 23093472 | 23094134 | 662 | 7738 |
| NRSF | pAb | Jurkat | 23094929 | 23095428 | 499 | 6362 |
| NRSF-poly | Jurkat | QuESTdata | 23091409 | 23091747 | 338 | 9963 |
| NRSF-poly | Jurkat | QuESTdata | 23093276 | 23094267 | 991 | 7769 |
| TAF | Hela | GSE8489 | 23086571 | 23086761 | 190 | 14875 |
| hScc1 | Bcell | GSE12603 | 23101072 | 23101583 | 511 | 213 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 23136292 | 23136497 | 205 | 694 |
| ER | E2-MCF7 | GSE14664 | 23147520 | 23147591 | 71 | 11855 |
| ER | MCF7 | GSE19013 | 23145203 | 23145962 | 759 | 9882 |
| Fos | K562 | GSE19551 | 23146344 | 23146670 | 326 | 10807 |
| Oct1 | H2O2-Hela | GSE14283 | 23154660 | 23154691 | 31 | 18975 |
| Oct1 | Hela | GSE14283 | 23139223 | 23139250 | 27 | 3536 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | E2-MCF7 | GSE14664 | 23121836 | 23121881 | 45 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 23116197 | 23116237 | 40 | 0 |
| FOXA1 | MCF7 | GSE15244 | 23126044 | 23127241 | 1197 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 23115321 | 23115357 | 36 | 0 |
| Oct1 | Hela | GSE14283 | 23115322 | 23115356 | 34 | 0 |
| Oct1 | Hela | GSE14283 | 23116196 | 23116234 | 38 | 0 |
| TFAP2C | MCF7 | GSE21234 | 23107651 | 23108430 | 779 | 0 |
| TFAP2C | MCF7 | GSE21234 | 23126169 | 23126901 | 732 | 0 |
| hScc1 | CdLS | GSE12603 | 23101072 | 23102050 | 978 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9739 | mRNA | SCNN1G | chr16 | 23101540 | 23135701 | 18227 | EST | chr16 | 23113699 | 23131926 | Non-exonic Bidirectional (NOB) pairs | |