Annotation Detail for CCL2
Basic Information Top
| Gene Symbol: | CCL2 ( GDCF-2,HC11,HSMCR30,MCAF,MCP-1,MCP1,MGC9434,SCYA2,SMC-CF ) |
|---|---|
| Gene Full Name: | chemokine (C-C motif) ligand 2 |
| Band: | 17q12 |
| Quick Links | Entrez ID:6347; OMIM: 158105; Uniprot ID:CCL2_HUMAN; ENSEMBL ID: ENSG00000108691; HGNC ID: 10618 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 24 | Pyrrolidone carboxylic acid. | |
| 37 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 24 | Pyrrolidone carboxylic acid. | Swiss-Prot 53.0 |
| 37 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 37 | N-linked | HMM predict |
| 40 | N-linked | HMM predict |
| 44 | Phosphoserine(PKG) | HMM predict |
| 50 | Phosphoserine(PKC) | HMM predict |
- RefSeq ID: NM_002982
- Location:chr17 29606408-29608330
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| NRSF | Jurkat | SISSRdata | 29588745 | 29588887 | 142 | 17593 |
| Oct1 | H2O2-Hela | GSE14283 | 29605416 | 29605448 | 32 | 977 |
| Oct1 | Hela | GSE14283 | 29605415 | 29605452 | 37 | 975 |
| Rb | Quiescent | GSE19898 | 29599487 | 29599884 | 397 | 6723 |
| STAT1 | HeLa | GSE12782 | 29605592 | 29606843 | 1251 | 191 |
| STAT1 | HeLa | GSE12783 | 29605681 | 29606737 | 1056 | 200 |
| p130 | shRbSenescent | GSE19898 | 29589810 | 29590351 | 541 | 16328 |
| No data |
| No data |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-10a | hsa-mir-10a | 17 | 20624982 |
| hsa-miR-10a* | hsa-mir-10a | 17 | 20624982 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 19404929 |
| hsa-miR-124 | hsa-mir-124-2 | 8 | 19404929 |
| hsa-miR-124 | hsa-mir-124-3 | 20 | 19404929 |
| hsa-miR-132 | hsa-mir-132 | 17 | 19819989 |
| hsa-miR-132* | hsa-mir-132 | 17 | 19819989 |
| hsa-miR-146a | hsa-mir-146a | 5 | 20195282 |
| hsa-miR-146a* | hsa-mir-146a | 5 | 20195282 |
| hsa-miR-155 | hsa-mir-155 | 21 | 21310411 |
| hsa-miR-155* | hsa-mir-155 | 21 | 21310411 |
| hsa-miR-221 | hsa-mir-221 | X | 21310411 |
| hsa-miR-221* | hsa-mir-221 | X | 21310411 |
| hsa-miR-222 | hsa-mir-222 | X | 21310411 |
| hsa-miR-222* | hsa-mir-222 | X | 21310411 |
| No data |
Cis-Nats regulation