AutismKB 2.0

Annotation Detail for CCL5


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Basic Information Top
Gene Symbol:CCL5 ( D17S136E,MGC17164,RANTES,SCYA5,SISd,TCP228 )
Gene Full Name: chemokine (C-C motif) ligand 5
Band: 17q12
Quick LinksEntrez ID:6352; OMIM: 187011; Uniprot ID:CCL5_HUMAN; ENSEMBL ID: ENSG00000161570; HGNC ID: 10632
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
27O-linked (GalNAc...); partial.
28O-linked (GalNAc...); partial.
Location(AA) Modifications Resource
27O-linked (GalNAc...); partial.Swiss-Prot 53.0
28O-linked (GalNAc...); partial.Swiss-Prot 53.0
Location(AA) Modification Resource
24O-linkedHMM predict
24Phosphoserine(IKK)HMM predict
24Phosphoserine(CDC2)HMM predict
27Phosphoserine(IKK)HMM predict
27O-linkedHMM predict
27O-linkedHMM predict
28O-linkedHMM predict
28Phosphoserine(ATM)HMM predict
30O-linkedHMM predict
31O-linkedHMM predict
73S-farnesylHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-125a-3p hsa-mir-125a 19 20589685
hsa-miR-125a-5p hsa-mir-125a 19 20589685
hsa-miR-146a hsa-mir-146a 5 18390754
hsa-miR-146a* hsa-mir-146a 5 18390754
hsa-miR-146b-3p hsa-mir-146b 10 18390754
hsa-miR-146b-3p hsa-mir-146b 10 19786024
hsa-miR-146b-5p hsa-mir-146b 10 18390754
hsa-miR-146b-5p hsa-mir-146b 10 19786024
hsa-miR-155 hsa-mir-155 21 20078880
hsa-miR-155* hsa-mir-155 21 20078880
hsa-miR-188-3p hsa-mir-188 X 19541842
hsa-miR-188-5p hsa-mir-188 X 19541842
hsa-miR-25 hsa-mir-25 7 19541842
hsa-miR-25* hsa-mir-25 7 19541842
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
10974 EST chr17 31220083 31236846 8881 mRNA CCL5 chr17 31222609 31231490 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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