AutismKB 2.0

Annotation Detail for BCAN


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Basic Information Top
Gene Symbol:BCAN ( BEHAB,CSPG7,MGC13038 )
Gene Full Name: brevican
Band: 1q23.1
Quick LinksEntrez ID:63827; OMIM: 600347; Uniprot ID:PGCB_HUMAN; ENSEMBL ID: ENSG00000132692; HGNC ID: 23059
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
130N-linked (GlcNAc...) (Potential).
337N-linked (GlcNAc...) (Potential).
905O-linked (GalNAc...) (Probable).
906O-linked (GalNAc...) (Probable).
Location(AA) Modifications Resource
130N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
337N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
67O-linkedHMM predict
74Phosphoserine(CDC2)HMM predict
130N-linkedHMM predict
135Phosphotyrosine(INSR)HMM predict
188Phosphothreonine(CDK)HMM predict
225Phosphotyrosine(SRC)HMM predict
337N-linkedHMM predict
343N-linkedHMM predict
370Phosphoserine(IKK)HMM predict
370O-linkedHMM predict
419Phosphoserine(CK2)HMM predict
459SulfotyrosineHMM predict
459Phosphotyrosine(EGFR)HMM predict
459Phosphotyrosine(INSR)HMM predict
459Phosphotyrosine(SRC)HMM predict
459Phosphotyrosine(Syk)HMM predict
487Phosphoserine(CK1)HMM predict
488Phosphoserine(CDK)HMM predict
488Phosphoserine(CDC2)HMM predict
488Phosphoserine(ATM)HMM predict
488Phosphoserine(MAPK)HMM predict
494O-linkedHMM predict
505Phosphoserine(CK1)HMM predict
507Phosphoserine(ATM)HMM predict
520Phosphoserine(MAPK)HMM predict
520Phosphoserine(CDC2)HMM predict
530Phosphoserine(PKA)HMM predict
545Phosphothreonine(MAPK)HMM predict
553Phosphoserine(CDK)HMM predict
553Phosphoserine(MAPK)HMM predict
553Phosphoserine(CDC2)HMM predict
587Phosphoserine(CK1)HMM predict
588O-linkedHMM predict
593O-linkedHMM predict
633O-linkedHMM predict
672S-palmitoylHMM predict
725Phosphoserine(CAMK2)HMM predict
727Phosphoserine(CK2)HMM predict
728Phosphothreonine(CDK)HMM predict
905O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_021948
  • Location:chr1 154878363-154895941
  • strand:+
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 154895808 154897266 1458 596
FoxA1 MCF7MACSdata 154896755 154897055 300 964
H3ac HepG2E 154895775 154896347 572 120
H3ac HepG2E 154896677 154898077 1400 1436
H3ac HepG2E 154898596 154898955 359 2834
H3ac HepG2E 154899511 154900115 604 3872
Myc hESGSE17917 154896466 154896765 299 674
Oct1 HelaGSE14283 154900527 154900570 43 4607
TAF k562GSE8489 154897440 154897916 476 1737
TAF k562GSE8489 154899369 154899628 259 3557
TFAP2C MCF7GSE21234 154896403 154897107 704 814
TFAP2C MCF7GSE21234 154897682 154898276 594 2038
USF2 HepG2E 154897601 154898007 406 1863
hScc1 BcellGSE12603 154896142 154897049 907 654
hScc1 CdLSGSE12603 154896105 154897013 908 618
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 154891889 154892215 326 0
CTCF G2GSE9613 154893804 154894453 649 0
CTCF G2GSE9613 154894976 154895400 424 0
NRSF mAbJurkat 154887377 154892849 5472 0
hScc1 BcellGSE12603 154893086 154893410 324 0
hScc1 BcellGSE12603 154893720 154894488 768 0
hScc1 CdLSGSE12603 154893318 154894701 1383 0
hScc1 G2GSE9613 154893804 154894197 393 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
1723 mRNA BCAN chr1 153424812 153442391 328 mRNA BCAN chr1 153424530 153427752Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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