AutismKB 2.0

Annotation Detail for PERP


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Basic Information Top
Gene Symbol:PERP ( KCP1,KRTCAP1,PIGPC1,RP3-496H19.1,THW,dJ496H19.1 )
Gene Full Name: PERP, TP53 apoptosis effector
Band: 6q23.3
Quick LinksEntrez ID:64065; OMIM: 609301; Uniprot ID:PERP_HUMAN; ENSEMBL ID: ENSG00000112378; HGNC ID: 17637
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_022121
  • Location:chr6 138453618-138470279
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 138472230 138472624 394 2148
CTCF CD4GSE12889 138478788 138479106 318 8668
CTCF CD4SISSRdata 138472230 138472624 394 2148
CTCF CD4SISSRdata 138478788 138479106 318 8668
CTCF G2GSE9613 138469869 138470705 836 8
CTCF G2GSE9613 138472223 138472449 226 2057
CTCF G2GSE9613 138478685 138478976 291 8551
ER MCF7GSE19013 138470101 138470998 897 270
Myc K562GSE19551 138478694 138479017 323 8576
Rb QuiescentGSE19898 138484644 138484756 112 14421
hScc1 BcellGSE12603 138472223 138472449 226 2057
hScc1 BcellGSE12603 138478409 138478976 567 8413
hScc1 CdLSGSE12603 138472223 138472449 226 2057
hScc1 CdLSGSE12603 138478548 138478976 428 8483
hScc1 G2GSE9613 138469900 138470705 805 23
hScc1 G2GSE9613 138472223 138472449 226 2057
hScc1 G2GSE9613 138478608 138478976 368 8513
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 138449391 138449833 442 4007
FOXA1 MCF7GSE15244 138451051 138451609 558 2289
FoxA1 MCF7MACSdata 138449449 138449711 262 4039
FoxA1 MCF7MACSdata 138451154 138451410 256 2337
P300 T30-glioblastomaGSE21026 138450112 138451663 1551 2731
RARA MCF7GSE15244 138449572 138451572 2000 3047
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FoxA1 MCF7MACSdata 138467529 138467806 277 0
H3K4me3 colorectalcancer 138469021 138469811 790 0
H3ac HepG2E 138468302 138469811 1509 0
TAF HelaGSE8489 138468655 138469664 1009 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-125b hsa-mir-125b-1 11 18056640
hsa-miR-125b hsa-mir-125b-2 21 18056640
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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