AutismKB 2.0

Annotation Detail for POPDC2


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Basic Information Top
Gene Symbol:POPDC2 ( POP2 )
Gene Full Name: popeye domain containing 2
Band: 3q13.33
Quick LinksEntrez ID:64091; OMIM: 605823; Uniprot ID:POPD2_HUMAN; ENSEMBL ID: ENSG00000121577; HGNC ID: 17648
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
4N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
4N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
48Phosphotyrosine(EGFR)HMM predict
125Phosphothreonine(PKC)HMM predict
146Phosphotyrosine(SRC)HMM predict
168Phosphoserine(IKK)HMM predict
168Phosphoserine(PKG)HMM predict
176SulfotyrosineHMM predict
185PhosphoserineHMM predict
185Phosphoserine(ATM)HMM predict
202O-linkedHMM predict
208O-linkedHMM predict
246Phosphotyrosine(INSR)HMM predict
295O-linkedHMM predict
300Phosphothreonine(MAPK)HMM predict
300O-linkedHMM predict
303O-linkedHMM predict
307Phosphothreonine(MAPK)HMM predict
307PhosphothreonineHMM predict
311O-linkedHMM predict
312O-linkedHMM predict
312Phosphothreonine(MAPK)HMM predict
317O-linkedHMM predict
317O-linkedHMM predict
317O-linkedHMM predict
324Phosphothreonine(PKC)HMM predict
329Phosphoserine(PKG)HMM predict
346Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_022135
  • Location:chr3 120843597-120862093
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Myc K562GSE19551 120840403 120840840 437 2976
NFkBII GM12878GSE19485 120838640 120842039 3399 3258
RARA MCF7GSE15244 120836969 120838193 1224 6017
TFAP2C MCF7GSE21234 120840235 120840786 551 3087
p63 keratinocytesGSE17611 120840202 120841154 952 2920
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 120855327 120855464 137 0
CTCF G2GSE9613 120861247 120861862 615 0
Stat6 IL-4-hr1GSE17850 120850150 120850742 592 0
Stat6 IL-4-hr4GSE17850 120844226 120844781 555 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018