AutismKB 2.0

Annotation Detail for SMOC2


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Basic Information Top
Gene Symbol:SMOC2 ( MST117,MSTP117,MSTP140,SMAP2,bA270C4A.1,bA37D8.1,dJ421D16.1 )
Gene Full Name: SPARC related modular calcium binding 2
Band: 6q27
Quick LinksEntrez ID:64094; OMIM: 607223; Uniprot ID:SMOC2_HUMAN; ENSEMBL ID: ENSG00000112562; HGNC ID: 20323
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
206N-linked (GlcNAc...) (Potential).
362N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
206N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
362N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
47Phosphoserine(CDC2)HMM predict
47Phosphoserine(CDK)HMM predict
206N-linkedHMM predict
209N-linkedHMM predict
211N-linkedHMM predict
257Phosphotyrosine(Jak)HMM predict
276Phosphotyrosine(Jak)HMM predict
276Phosphotyrosine(Abl)HMM predict
276Phosphotyrosine(SRC)HMM predict
332Phosphoserine(CK1)HMM predict
334Phosphoserine(CK1)HMM predict
362N-linkedHMM predict
383Phosphoserine(PKG)HMM predict
405Phosphoserine(CK2)HMM predict
424Phosphothreonine(PKC)HMM predict
429Phosphothreonine(CDC2)HMM predict
429Phosphothreonine(PKA)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_022138
  • Location:chr6 168584879-168810595
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 168584254 168585105 851 200
H3K27me3 colorectalcancer 168583431 168584169 738 1080
SRF HepG2GSE8489 168574744 168575877 1133 9569
hScc1 BcellGSE12603 168584279 168584990 711 245
hScc1 G2GSE9613 168584279 168585105 826 188
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 168818966 168819370 404 8573
hScc1 BcellGSE12603 168823774 168823994 220 13289
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 168585525 168585908 383 0
CTCF G2GSE9613 168596477 168596950 473 0
CTCF G2GSE9613 168599493 168599894 401 0
CTCF G2GSE9613 168600509 168601300 791 0
CTCF G2GSE9613 168616793 168617079 286 0
CTCF G2GSE9613 168619066 168619312 246 0
CTCF G2GSE9613 168622329 168622699 370 0
CTCF G2GSE9613 168642508 168642657 149 0
CTCF G2GSE9613 168646955 168647289 334 0
CTCF G2GSE9613 168669077 168669796 719 0
CTCF G2GSE9613 168670655 168671249 594 0
CTCF G2GSE9613 168674943 168675415 472 0
CTCF G2GSE9613 168681097 168681300 203 0
CTCF G2GSE9613 168681587 168683245 1658 0
CTCF G2GSE9613 168688931 168689203 272 0
CTCF G2GSE9613 168698805 168699426 621 0
CTCF G2GSE9613 168716673 168717265 592 0
CTCF G2GSE9613 168717679 168718466 787 0
CTCF G2GSE9613 168726025 168726410 385 0
CTCF G2GSE9613 168727455 168727748 293 0
CTCF G2GSE9613 168733086 168733940 854 0
CTCF G2GSE9613 168741083 168741664 581 0
CTCF G2GSE9613 168745256 168745506 250 0
CTCF G2GSE9613 168750546 168751077 531 0
CTCF G2GSE9613 168753705 168754329 624 0
CTCF G2GSE9613 168759444 168759588 144 0
CTCF G2GSE9613 168766408 168766652 244 0
CTCF G2GSE9613 168767588 168767941 353 0
CTCF G2GSE9613 168768980 168769274 294 0
CTCF G2GSE9613 168780467 168780629 162 0
CTCF G2GSE9613 168781159 168781358 199 0
CTCF G2GSE9613 168785856 168786179 323 0
CTCF G2GSE9613 168788170 168788423 253 0
CTCF G2GSE9613 168790940 168791071 131 0
CTCF G2GSE9613 168791549 168791899 350 0
CTCF G2GSE9613 168792418 168792802 384 0
CTCF G2GSE9613 168797819 168798120 301 0
CTCF G2GSE9613 168804916 168805263 347 0
ER MCF7GSE19013 168596306 168596919 613 0
ER MCF7GSE19013 168645689 168646114 425 0
ER MCF7GSE19013 168658315 168658741 426 0
TFAP2C MCF7GSE21234 168594483 168594935 452 0
TFAP2C MCF7GSE21234 168668227 168668675 448 0
TFAP2C MCF7GSE21234 168689056 168689307 251 0
TFAP2C MCF7GSE21234 168779230 168779683 453 0
TFAP2C MCF7GSE21234 168790840 168791343 503 0
TFAP2C MCF7GSE21234 168809437 168810213 776 0
hScc1 BcellGSE12603 168611709 168612020 311 0
hScc1 BcellGSE12603 168639070 168639453 383 0
hScc1 BcellGSE12603 168652312 168652523 211 0
hScc1 BcellGSE12603 168682140 168682446 306 0
hScc1 BcellGSE12603 168699211 168699456 245 0
hScc1 BcellGSE12603 168725277 168725582 305 0
hScc1 BcellGSE12603 168767588 168767810 222 0
hScc1 BcellGSE12603 168796215 168797928 1713 0
hScc1 G2GSE9613 168759444 168759984 540 0
hScc1 G2GSE9613 168766408 168766652 244 0
p63 keratinocytesGSE17611 168600107 168601021 914 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
23485 mRNA SMOC2 chr6 168660586 168886303 10566 mRNA chr6 168749696 168760262 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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