AutismKB 2.0

Annotation Detail for C10orf54


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Basic Information Top
Gene Symbol:C10orf54 ( GI24,PP2135,SISP1 )
Gene Full Name: chromosome 10 open reading frame 54
Band: 10q22.1
Quick LinksEntrez ID:64115; OMIM: NA; Uniprot ID:GI24_HUMAN; ENSEMBL ID: ENSG00000107738; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
49N-linked (GlcNAc...) (Potential).
91N-linked (GlcNAc...) (Potential).
128N-linked (GlcNAc...) (Potential).
235Phosphoserine.
248Phosphoserine.
Location(AA) Modifications Resource
49N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
91N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
128N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
49N-linkedHMM predict
91N-linkedHMM predict
135N-linkedHMM predict
185Phosphoserine(ATM)HMM predict
190N-linkedHMM predict
283O-linkedHMM predict
284Phosphothreonine(MAPK)HMM predict
284Phosphothreonine(CDC2)HMM predict
284Phosphothreonine(CDK)HMM predict
287Phosphoserine(CDK)HMM predict
287Phosphoserine(IKK)HMM predict
287Phosphoserine(CDC2)HMM predict
287Phosphoserine(MAPK)HMM predict
305Phosphoserine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_022153
  • Location:chr10 73177318-73203342
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER Fulvestrant-MCF7GSE14664 73201042 73201079 37 0
P300 T30-glioblastomaGSE21026 73196268 73197981 1713 0
RARA MCF7GSE15244 73196562 73197831 1269 0
RARG MCF7GSE15244 73196562 73197795 1233 0
TFAP2C MCF7GSE21234 73197199 73197664 465 0
hScc1 BcellGSE12603 73177922 73178705 783 0
hScc1 BcellGSE12603 73179875 73180474 599 0
p130 shRbQuiescentGSE19898 73195078 73195508 430 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018