AutismKB 2.0

Annotation Detail for XYLT1


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Basic Information Top
Gene Symbol:XYLT1 ( PXYLT1,XT-I,XT1,XTI,XYLTI )
Gene Full Name: xylosyltransferase I
Band: 16p12.3
Quick LinksEntrez ID:64131; OMIM: 608124; Uniprot ID:XYLT1_HUMAN; ENSEMBL ID: ENSG00000103489; HGNC ID: 15516
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
226N-linked (GlcNAc...) (Potential).
421N-linked (GlcNAc...) (Potential).
777N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
226N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
421N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
777N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
34N-linkedHMM predict
46MethylarginineHMM predict
98MethylarginineHMM predict
106MethylarginineHMM predict
113MethylarginineHMM predict
226N-linkedHMM predict
242Phosphothreonine(PKC)HMM predict
246Phosphoserine(CDC2)HMM predict
251SulfotyrosineHMM predict
251Phosphotyrosine(Syk)HMM predict
251Phosphotyrosine(Abl)HMM predict
251Phosphotyrosine(SRC)HMM predict
320Phosphotyrosine(INSR)HMM predict
357SulfotyrosineHMM predict
378Phosphotyrosine(Jak)HMM predict
384Phosphothreonine(CDC2)HMM predict
617SulfotyrosineHMM predict
635Phosphotyrosine(Syk)HMM predict
635Phosphotyrosine(SRC)HMM predict
677Phosphotyrosine(Syk)HMM predict
729Phosphoserine(MAPK)HMM predict
777N-linkedHMM predict
808Phosphotyrosine(Syk)HMM predict
867Phosphotyrosine(Syk)HMM predict
942Phosphoserine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_022166
  • Location:chr16 17103683-17472238
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 17478191 17478384 193 6049
CTCF CD4SISSRdata 17478191 17478384 193 6049
Rb SenescentGSE19898 17472699 17472935 236 579
Rb SenescentGSE19898 17473117 17473455 338 1048
Stat6 IL-4-hr1GSE17850 17477959 17478591 632 6037
hScc1 CdLSGSE12603 17478082 17478626 544 6116
p130 SenescentGSE19898 17472438 17473154 716 558
p130 shRbSenescentGSE19898 17472723 17473236 513 741
p130 shRbSenescentGSE19898 17473302 17473450 148 1138
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 17090401 17090437 36 13265
ETS1 JurkatGSE17954 17102896 17103785 889 343
Fos K562GSE19551 17102954 17103424 470 495
Myc K562GSE19551 17103016 17103447 431 452
NRSF JurkatGSE13047 17085586 17086030 444 17876
NRSF mAbJurkat 17084302 17085874 1572 18596
NRSF mAbJurkat 17086327 17088355 2028 16343
NRSF mAbJurkat 17090469 17091177 708 12861
NRSF-mono JurkatQuESTdata 17085598 17086029 431 17870
NRSF-poly JurkatQuESTdata 17085375 17086062 687 17965
Nanog hESGSE18292 17085018 17085465 447 18442
Nanog hESGSE18292 17094323 17094625 302 9210
Oct1 HelaGSE14283 17090404 17090436 32 13264
Sox2 hESGSE18292 17085014 17085676 662 18339
Sox2 hESGSE18292 17094315 17094582 267 9235
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 17225957 17227011 1054 0
CBP T30-glioblastomaGSE21026 17413421 17414670 1249 0
CTCF CD4GSE12889 17195648 17195833 185 0
CTCF CD4SISSRdata 17195648 17195833 185 0
CTCF JurkatGSE12889 17195586 17195963 377 0
CTCF G2GSE9613 17158623 17158785 162 0
CTCF G2GSE9613 17201603 17201918 315 0
CTCF G2GSE9613 17334238 17334501 263 0
CTCF G2GSE9613 17469145 17469702 557 0
CTCF G2GSE9613 17470021 17470370 349 0
ER E2-MCF7GSE14664 17112603 17112638 35 0
ER E2-MCF7GSE14664 17334503 17334535 32 0
ER E2-MCF7GSE14664 17362990 17363023 33 0
ER E2-MCF7GSE14664 17382711 17382752 41 0
ER MCF7GSE19013 17296792 17297266 474 0
ER MCF7GSE19013 17297721 17298432 711 0
ER MCF7GSE19013 17345642 17346270 628 0
ER MCF7GSE19013 17460763 17461406 643 0
FOXA1 MCF7GSE15244 17305447 17306270 823 0
FOXA1 MCF7GSE15244 17316981 17317722 741 0
FOXA1 MCF7GSE15244 17319347 17320039 692 0
FOXA1 MCF7GSE15244 17401010 17401621 611 0
Fos K562GSE19551 17274388 17274909 521 0
FoxA1 MCF7MACSdata 17283190 17283421 231 0
IGF1R DFBGSE23792 17328802 17329386 584 0
NRSF JurkatGSE13047 17140035 17140871 836 0
NRSF JurkatGSE13047 17150891 17151791 900 0
NRSF JurkatGSE13047 17167264 17167820 556 0
NRSF JurkatGSE13047 17179177 17180106 929 0
NRSF JurkatGSE13047 17373522 17374294 772 0
NRSF mAbJurkat 17135505 17136370 865 0
NRSF mAbJurkat 17137666 17139173 1507 0
NRSF mAbJurkat 17139585 17141700 2115 0
NRSF mAbJurkat 17142316 17142798 482 0
NRSF mAbJurkat 17144358 17145052 694 0
NRSF mAbJurkat 17145452 17146081 629 0
NRSF mAbJurkat 17147630 17148015 385 0
NRSF mAbJurkat 17148403 17152442 4039 0
NRSF mAbJurkat 17153000 17154395 1395 0
NRSF mAbJurkat 17156878 17158277 1399 0
NRSF mAbJurkat 17158623 17159001 378 0
NRSF mAbJurkat 17159416 17160527 1111 0
NRSF mAbJurkat 17160772 17162368 1596 0
NRSF mAbJurkat 17166319 17166489 170 0
NRSF mAbJurkat 17167268 17167844 576 0
NRSF mAbJurkat 17168174 17169412 1238 0
NRSF mAbJurkat 17169995 17170464 469 0
NRSF mAbJurkat 17176919 17179942 3023 0
NRSF mAbJurkat 17180762 17182016 1254 0
NRSF mAbJurkat 17182576 17183399 823 0
NRSF mAbJurkat 17371372 17371956 584 0
NRSF mAbJurkat 17372353 17376259 3906 0
NRSF mAbJurkat 17376874 17377424 550 0
NRSF-mono JurkatQuESTdata 17140040 17140689 649 0
NRSF-mono JurkatQuESTdata 17151062 17151787 725 0
NRSF-mono JurkatQuESTdata 17167381 17167792 411 0
NRSF-mono JurkatQuESTdata 17179351 17180051 700 0
NRSF-mono JurkatQuESTdata 17373621 17374293 672 0
NRSF pAbJurkat 17139585 17141186 1601 0
NRSF pAbJurkat 17149617 17150974 1357 0
NRSF pAbJurkat 17151276 17152442 1166 0
NRSF pAbJurkat 17178835 17179942 1107 0
NRSF-poly JurkatQuESTdata 17140092 17140769 677 0
NRSF-poly JurkatQuESTdata 17151060 17151861 801 0
NRSF-poly JurkatQuESTdata 17167283 17167864 581 0
NRSF-poly JurkatQuESTdata 17179177 17180097 920 0
NRSF-poly JurkatQuESTdata 17373761 17374181 420 0
Nanog hESGSE18292 17311042 17311278 236 0
Nanog hESGSE18292 17319689 17319923 234 0
Nanog hESGSE18292 17379075 17379661 586 0
Nanog hESGSE18292 17394040 17394425 385 0
Nanog hESGSE18292 17424653 17425002 349 0
Nanog hESGSE18292 17434905 17435350 445 0
Oct1 H2O2-HelaGSE14283 17103763 17103794 31 0
Oct1 H2O2-HelaGSE14283 17112607 17112636 29 0
Oct1 H2O2-HelaGSE14283 17132072 17132103 31 0
Oct1 H2O2-HelaGSE14283 17135964 17136007 43 0
Oct1 H2O2-HelaGSE14283 17179918 17179955 37 0
Oct1 H2O2-HelaGSE14283 17188838 17188866 28 0
Oct1 H2O2-HelaGSE14283 17268065 17268092 27 0
Oct1 H2O2-HelaGSE14283 17273875 17273903 28 0
Oct1 H2O2-HelaGSE14283 17304992 17305022 30 0
Oct1 H2O2-HelaGSE14283 17334197 17334226 29 0
Oct1 H2O2-HelaGSE14283 17335236 17335263 27 0
Oct1 H2O2-HelaGSE14283 17362322 17362353 31 0
Oct1 H2O2-HelaGSE14283 17363001 17363030 29 0
Oct1 H2O2-HelaGSE14283 17364795 17364820 25 0
Oct1 H2O2-HelaGSE14283 17376232 17376262 30 0
Oct1 H2O2-HelaGSE14283 17427108 17427145 37 0
Oct1 HelaGSE14283 17103763 17103792 29 0
Oct1 HelaGSE14283 17112607 17112687 80 0
Oct1 HelaGSE14283 17132072 17132105 33 0
Oct1 HelaGSE14283 17135899 17136079 180 0
Oct1 HelaGSE14283 17141032 17141069 37 0
Oct1 HelaGSE14283 17179918 17179953 35 0
Oct1 HelaGSE14283 17189400 17189427 27 0
Oct1 HelaGSE14283 17224419 17224460 41 0
Oct1 HelaGSE14283 17225926 17225984 58 0
Oct1 HelaGSE14283 17235398 17235428 30 0
Oct1 HelaGSE14283 17273854 17273912 58 0
Oct1 HelaGSE14283 17279830 17279858 28 0
Oct1 HelaGSE14283 17283260 17283292 32 0
Oct1 HelaGSE14283 17317950 17317991 41 0
Oct1 HelaGSE14283 17334196 17334226 30 0
Oct1 HelaGSE14283 17339956 17339992 36 0
Oct1 HelaGSE14283 17362322 17362354 32 0
Oct1 HelaGSE14283 17362997 17363025 28 0
Oct1 HelaGSE14283 17369373 17369457 84 0
Oct1 HelaGSE14283 17371243 17371279 36 0
Oct1 HelaGSE14283 17376231 17376264 33 0
Oct1 HelaGSE14283 17408977 17409040 63 0
Oct1 HelaGSE14283 17427107 17427145 38 0
Oct1 HelaGSE14283 17432422 17432455 33 0
Oct1 HelaGSE14283 17455373 17455446 73 0
Oct1 HelaGSE14283 17463791 17463827 36 0
P300 T0-glioblastomaGSE21026 17226080 17226783 703 0
P300 T30-glioblastomaGSE21026 17206689 17207577 888 0
P300 T30-glioblastomaGSE21026 17225756 17226970 1214 0
P300 T30-glioblastomaGSE21026 17274103 17275075 972 0
P300 T30-glioblastomaGSE21026 17381835 17382715 880 0
P300 T30-glioblastomaGSE21026 17390555 17391445 890 0
P300 T30-glioblastomaGSE21026 17397889 17399614 1725 0
P300 T30-glioblastomaGSE21026 17413160 17414481 1321 0
RARA MCF7GSE15244 17305269 17306497 1228 0
RNAII Tamoxifen-MCF7GSE14664 17279063 17279152 89 0
RNAII Tamoxifen-MCF7GSE14664 17281224 17281312 88 0
Rb GrowingGSE19898 17276487 17276718 231 0
TFAP2C MCF7GSE21234 17345765 17346255 490 0
TFAP2C MCF7GSE21234 17376857 17377812 955 0
TFAP2C MCF7GSE21234 17380650 17381060 410 0
TFAP2C MCF7GSE21234 17390718 17391430 712 0
VDR GM10855-stimGSE22484 17225809 17227158 1349 0
VDR GM10861-stimGSE22484 17225836 17227382 1546 0
hScc1 BcellGSE12603 17253863 17254087 224 0
hScc1 BcellGSE12603 17279273 17279992 719 0
hScc1 BcellGSE12603 17361195 17361526 331 0
hScc1 BcellGSE12603 17417698 17418417 719 0
hScc1 BcellGSE12603 17469007 17470263 1256 0
hScc1 BcellGSE12603 17471019 17472048 1029 0
hScc1 CdLSGSE12603 17279310 17279992 682 0
hScc1 CdLSGSE12603 17417672 17418684 1012 0
hScc1 CdLSGSE12603 17469007 17469738 731 0
p130 shRbQuiescentGSE19898 17468918 17469452 534 0
p130 shRbSenescentGSE19898 17274606 17274929 323 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9672 EST chr16 17135861 17140090 224 mRNA XYLT1 chr16 17108839 17472239Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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